Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_F02
         (477 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    28   3.0  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    28   3.0  
U39652-2|AAA80404.1|  817|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z81487-5|CAB03999.1|  112|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U88315-14|AAB42366.2|  355|Caenorhabditis elegans Hypothetical p...    27   9.2  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      27   9.2  
AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +3

Query: 261 VPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 365
           +PN E ++  I +E + + +KKA+ ++R +V  ++
Sbjct: 454 IPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIE 488


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 10/45 (22%), Positives = 26/45 (57%)
 Frame = +3

Query: 246 ATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 380
           A + G+  + +  + + ++ +  +L   I+DLR+L+  +  R+E+
Sbjct: 635 ARIFGIKTSSIPEETLKIQTKKSELTDEINDLRDLMEQMDERIES 679


>U39652-2|AAA80404.1|  817|Caenorhabditis elegans Hypothetical
           protein R07E4.5 protein.
          Length = 817

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 294 SLENENKDLKKAIDDLRN 347
           SLE  N+D+KK IDD+++
Sbjct: 271 SLEKSNEDIKKEIDDMKS 288


>Z81487-5|CAB03999.1|  112|Caenorhabditis elegans Hypothetical
           protein C54E10.6 protein.
          Length = 112

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +3

Query: 204 EKAYYESLSKMDSVATLAGVPNTELS---TKVIS-LENENKDLKKAIDDLR 344
           EKA      K +   +L   PN E+    T V++ L  + + +KK +DDLR
Sbjct: 43  EKAEKVKSMKKEEAGSLKSPPNDEMESEFTHVLNELSKQKETIKKLLDDLR 93


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 156 LLHEKVWLDRNVYNDAEKAYYESLSKMDSV 245
           LLH +++   + Y+DAE+ Y ES   M+++
Sbjct: 760 LLHAQIYTILSRYDDAEQLYLESSRPMEAL 789


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 156 LLHEKVWLDRNVYNDAEKAYYESLSKMDSV 245
           LLH +++   + Y+DAE+ Y ES   M+++
Sbjct: 760 LLHAQIYTILSRYDDAEQLYLESSRPMEAL 789


>U88315-14|AAB42366.2|  355|Caenorhabditis elegans Hypothetical
           protein C37H5.2 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 198 DAEKAYYESLS-KMDSVATLAGVPNTELSTKVISLENENKDLK 323
           +AE   + +L  K  S        NTE++T  ++ ENE+ +LK
Sbjct: 27  EAENRIFTALGIKFSSELVQIPFKNTEINTITVNCENESSELK 69


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 156 LLHEKVWLDRNVYNDAEKAYYESLSKMDSV 245
           LLH +++   + Y+DAE+ Y ES   M+++
Sbjct: 760 LLHAQIYTILSRYDDAEQLYLESSRPMEAL 789


>AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical
           protein F35B3.7 protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 255 AGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 377
           AG PN  +++ +     E KDL++ + DLR  V +L+  V+
Sbjct: 535 AGCPNCSVASNI-----EEKDLRREVQDLRQEVANLKQVVD 570


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,114,208
Number of Sequences: 27780
Number of extensions: 166311
Number of successful extensions: 519
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)