Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_E23
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.64 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   1.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.9  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 498 NTISQYSIIQIVPPKTQLLSIKTTNNR 578
           NT+ QY++ Q+  P  ++  IK T N+
Sbjct: 417 NTLPQYTVQQLDFPGIEIADIKLTTNQ 443


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 267 PDLLSYFAIVENESKARVKFNLM 335
           P+LL YFA +    K + + NL+
Sbjct: 830 PNLLRYFASIATNPKEQAQLNLL 852


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 247 QESRCWFISHSYFV 206
           +++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 609 VKCLTILFLYTNLF 650
           + C+ ++FLY N+F
Sbjct: 354 IPCIIMVFLYYNIF 367


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 94  TISTSILPLKIKWVKD 141
           +++   LPL I W+KD
Sbjct: 633 SVTRGDLPLSISWLKD 648


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,749
Number of Sequences: 438
Number of extensions: 3148
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)