Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_E20
(337 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 180 1e-45
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 180 1e-45
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 180 1e-45
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 180 1e-45
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 178 4e-45
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 33 0.22
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 33 0.22
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 33 0.22
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 31 0.88
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 31 0.88
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 31 0.88
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 31 0.88
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 31 0.88
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 31 1.2
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 30 2.0
BC110614-1|AAI10615.1| 387|Homo sapiens CLEC4M protein protein. 30 2.0
BC038851-1|AAH38851.1| 399|Homo sapiens C-type lectin domain fa... 30 2.0
AY343913-1|AAR04559.1| 353|Homo sapiens L-SIGN variant protein. 30 2.0
AY042240-1|AAK91865.1| 263|Homo sapiens sDC-SIGN2 type III isof... 30 2.0
AY042238-1|AAK91863.1| 332|Homo sapiens sDC-SIGN2 type I isofor... 30 2.0
AY042234-1|AAK91859.1| 399|Homo sapiens mDC-SIGN2 type I isofor... 30 2.0
AF290887-1|AAK20998.1| 376|Homo sapiens L-SIGN protein. 30 2.0
AF245219-1|AAG13848.2| 399|Homo sapiens probable mannose bindin... 30 2.0
AF209481-1|AAG13815.2| 399|Homo sapiens probable mannose bindin... 30 2.0
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 29 2.7
BC107477-1|AAI07478.1| 249|Homo sapiens BEAN protein protein. 29 4.7
AE006463-5|AAK61225.1| 321|Homo sapiens unknown protein. 28 6.2
AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog prot... 28 8.2
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHANLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 43 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 102
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 103 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 141
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 1e-45
Identities = 79/99 (79%), Positives = 88/99 (88%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 178 bits (433), Expect = 4e-45
Identities = 78/99 (78%), Positives = 87/99 (87%)
Frame = +3
Query: 3 RXPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSG 182
+ PIRPD+VN VH ++ KN+RQPY VS+ AGHQT AESWGTGRAVARIPRVRGGGTHRSG
Sbjct: 29 KAPIRPDMVNFVHTNLRKNNRQPYAVSELAGHQTRAESWGTGRAVARIPRVRGGGTHRSG 88
Query: 183 QGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 299
QGAFGNMCRGGRMFAPTK WRRWHRRVN Q+R A+ S+
Sbjct: 89 QGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSA 127
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 213 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 82
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 210 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 82
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 213 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 82
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 210 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 82
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 213 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 82
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -2
Query: 210 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 82
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = +3
Query: 84 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 263
++ G E W G + P ++ G ++G G C AP++P R
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64
Query: 264 NLRQRRAALGSS 299
R + A GSS
Sbjct: 65 RARTQALAGGSS 76
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = +3
Query: 84 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 263
++ G E W G + P ++ G ++G G C AP++P R
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64
Query: 264 NLRQRRAALGSS 299
R + A GSS
Sbjct: 65 RARTQALAGGSS 76
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = +3
Query: 84 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 263
++ G E W G + P ++ G ++G G C AP++P R
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64
Query: 264 NLRQRRAALGSS 299
R + A GSS
Sbjct: 65 RARTQALAGGSS 76
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = +3
Query: 84 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 263
++ G E W G + P ++ G ++G G C AP++P R
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64
Query: 264 NLRQRRAALGSS 299
R + A GSS
Sbjct: 65 RARTQALAGGSS 76
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = +3
Query: 84 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRV 263
++ G E W G + P ++ G ++G G C AP++P R
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRG 64
Query: 264 NLRQRRAALGSS 299
R + A GSS
Sbjct: 65 RARTQALAGGSS 76
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 45 SMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 218
++++ +RQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 153 VRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGS 296
V G G +R G G++C+ ++ WRRW+ R N R+ RAA+ S
Sbjct: 479 VSGEGENR---GCCGSLCQAISKSKLSRRWRRWN-RFNRRRCRAAVKS 522
>BC110614-1|AAI10615.1| 387|Homo sapiens CLEC4M protein protein.
Length = 387
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 363 GWNDNRCDVDNYWICKKP-AAC 383
>BC038851-1|AAH38851.1| 399|Homo sapiens C-type lectin domain
family 4, member M protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AY343913-1|AAR04559.1| 353|Homo sapiens L-SIGN variant protein.
Length = 353
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 329 GWNDNRCDVDNYWICKKP-AAC 349
>AY042240-1|AAK91865.1| 263|Homo sapiens sDC-SIGN2 type III isoform
protein.
Length = 263
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 239 GWNDNRCDVDNYWICKKP-AAC 259
>AY042238-1|AAK91863.1| 332|Homo sapiens sDC-SIGN2 type I isoform
protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 308 GWNDNRCDVDNYWICKKP-AAC 328
>AY042234-1|AAK91859.1| 399|Homo sapiens mDC-SIGN2 type I isoform
protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AF290887-1|AAK20998.1| 376|Homo sapiens L-SIGN protein.
Length = 376
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 352 GWNDNRCDVDNYWICKKP-AAC 372
>AF245219-1|AAG13848.2| 399|Homo sapiens probable mannose binding
C-type lectin DC-SIGNR protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AF209481-1|AAG13815.2| 399|Homo sapiens probable mannose binding
C-type lectin DC-SIGNR protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 89 GWSPNQC*IMGYWTCCRPNSAC 154
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Frame = +2
Query: 125 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 289
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 290 GQQPLLL----PASXRSFR 334
P L P S R +R
Sbjct: 139 HGAPSCLSTPAPRSCRPWR 157
>BC107477-1|AAI07478.1| 249|Homo sapiens BEAN protein protein.
Length = 249
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 195 RRHPDRTYEYHHHGHAEFGRQHVQY 121
+RH R + +HHH H R+H +Y
Sbjct: 58 QRHRHRHHRHHHHHHHHRRRRHREY 82
>AE006463-5|AAK61225.1| 321|Homo sapiens unknown protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 105 SAESWGTGRAVARI-PRVRG-GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 278
+A G G AR P + G G RSG+GA G + APT+P R LR
Sbjct: 5 AARRAGPGGGAARGGPHLGGCGSAARSGRGAGRGGAAGAQPPAPTRPLRVDAAPGRLRPA 64
Query: 279 RAALGSSRCCYRRPXARS 332
AA ++ R AR+
Sbjct: 65 LAAAAATIASRARARARA 82
>AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog
protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = -2
Query: 210 HDTCYRRHPDRTYEYHHHGH----AEFGRQHVQYPMIQHWFGDQPPC 82
H + HP + +HHH H HV+ + G++ PC
Sbjct: 376 HPPSHHPHPHPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPC 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,518,850
Number of Sequences: 237096
Number of extensions: 1051781
Number of successful extensions: 3857
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3811
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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