Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_E08
(523 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 79 9e-15
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 79 9e-15
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 79 9e-15
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 79 9e-15
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 79 9e-15
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 79 9e-15
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 79 9e-15
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 79 9e-15
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 79 9e-15
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 79 9e-15
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 79 9e-15
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 79 9e-15
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 79 9e-15
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 79 9e-15
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 79 9e-15
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 79 9e-15
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 79 9e-15
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 79 1e-14
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 79 1e-14
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 79 1e-14
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 79 1e-14
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 78 2e-14
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 73 5e-13
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 70 6e-12
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 40 0.005
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 40 0.005
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 40 0.005
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 40 0.005
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 37 0.037
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 37 0.037
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 37 0.037
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 37 0.037
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 37 0.037
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 37 0.037
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 37 0.037
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 37 0.037
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 37 0.037
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 82 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 127
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 113 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 155
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 80 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 125
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 111 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 153
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 123 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 168
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 154 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 196
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 185 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 230
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 216 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 257
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 128
Score = 65.3 bits (152), Expect = 1e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGA-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 79.0 bits (186), Expect = 9e-15
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 48 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGP 93
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 79 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 120
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 83 DVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGEEAANVTGP 128
Score = 64.5 bits (150), Expect = 2e-10
Identities = 42/106 (39%), Positives = 51/106 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 514
+ PGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 114 VEGEKGE-EAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 156
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGP
Sbjct: 118 DVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGP 163
Score = 59.7 bits (138), Expect = 6e-09
Identities = 37/101 (36%), Positives = 48/101 (47%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A +V GTVKWFNV++GYGFINRNDTK + P
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPR 499
+ PGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGA-EATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGP
Sbjct: 118 DVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGP 163
Score = 59.7 bits (138), Expect = 6e-09
Identities = 37/101 (36%), Positives = 48/101 (47%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A +V GTVKWFNV++GYGFINRNDTK + P
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPR 499
+ PGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGA-EATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 78.6 bits (185), Expect = 1e-14
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGP
Sbjct: 118 DVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGP 163
Score = 59.7 bits (138), Expect = 6e-09
Identities = 37/101 (36%), Positives = 48/101 (47%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A +V GTVKWFNV++GYGFINRNDTK + P
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPR 499
+ PGG PVKGS YA ++R+ R++ PR
Sbjct: 149 VEGEKGA-EATNVTGPGGVPVKGSRYAPNRRKS--RRFIPR 186
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 77.8 bits (183), Expect = 2e-14
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQTAI +NNPRK +RS+GDGE VEF VV GEKG EAA VTGP
Sbjct: 115 DVFVHQTAIKKNNPRKYLRSLGDGETVEFDVVEGEKGAEAANVTGP 160
Score = 66.5 bits (155), Expect = 5e-11
Identities = 41/104 (39%), Positives = 50/104 (48%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
V+A KV GTVKWFNV++GYGFINRNDTK + P
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ P G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGA-EAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 73.3 bits (172), Expect = 5e-13
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVH TA +NNPRK +RSVGDGE VEF VV GEKG +AA VTGP
Sbjct: 79 DVFVHHTAXKKNNPRKYLRSVGDGEXVEFDVVEGEKGAKAANVTGP 124
Score = 62.1 bits (144), Expect = 1e-09
Identities = 42/104 (40%), Positives = 51/104 (49%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV GTVKWFNV++GYGFI+RNDTK + P
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGYHRQYFPRQGG 508
+ PGG PV+GS YAAD R ++R+Y PR G
Sbjct: 110 VEGEKGA-KAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRPRG 149
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 69.7 bits (163), Expect = 6e-12
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +3
Query: 288 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGP
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGP 67
Score = 31.9 bits (69), Expect = 1.4
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 422 PGGEPVKGSPYAADKRRGYHRQYFPR 499
PGG PVKGS YA ++R+ R++ PR
Sbjct: 67 PGGVPVKGSRYAPNRRKS--RRFIPR 90
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 258 SSTGMTPR*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGP
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGP 112
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 258 SSTGMTPR*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGP
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGP 112
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 258 SSTGMTPR*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGP
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGP 112
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.005
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 258 SSTGMTPR*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
+ + P DVFVHQ+ + + RS+ +GEAVEF KG E+ VTGP
Sbjct: 62 AGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGP 112
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GF++
Sbjct: 41 AGICKWFNVRMGFGFLS 57
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 102
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 102
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 79
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 79
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 79
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 79
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 38 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 79
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 8 TGHCKWFNVRMGFGFIS 24
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 102
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 37.1 bits (82), Expect = 0.037
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 285 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGP
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGP 102
Score = 29.5 bits (63), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 215 SGTVKWFNVKSGYGFIN 265
+G KWFNV+ G+GFI+
Sbjct: 31 TGHCKWFNVRMGFGFIS 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,296,785
Number of Sequences: 237096
Number of extensions: 1453452
Number of successful extensions: 3420
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3420
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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