Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_E08
(523 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p pro... 83 2e-16
AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA... 83 2e-16
U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein ... 77 2e-14
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 31 0.95
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 31 0.95
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 31 0.95
BT024236-1|ABC86298.1| 959|Drosophila melanogaster LD10772p pro... 29 5.1
AY119108-1|AAM50968.1| 647|Drosophila melanogaster RE09079p pro... 29 5.1
AE014297-360|AAF51949.1| 959|Drosophila melanogaster CG10979-PA... 29 5.1
AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p pro... 28 6.7
AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple... 28 6.7
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ... 28 6.7
AJ243708-1|CAB57344.3| 963|Drosophila melanogaster prickle pk i... 28 6.7
AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB... 28 6.7
AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA... 28 6.7
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC... 28 6.7
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB... 28 6.7
AE013599-308|AAM68908.1| 963|Drosophila melanogaster CG11084-PA... 28 6.7
>AY061440-1|AAL28988.1| 352|Drosophila melanogaster LD37574p
protein.
Length = 352
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +3
Query: 279 R*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
R DVFVHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 84 REDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGP 131
Score = 64.9 bits (151), Expect = 6e-11
Identities = 39/94 (41%), Positives = 45/94 (47%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV+GTVKWFNVKSGYGFINRNDT+ P
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGY 478
+ P GEPV+GS +AADKRR +
Sbjct: 117 VIGEKGN-EAANVTGPSGEPVRGSQFAADKRRNF 149
>AE014296-2093|AAF49961.3| 352|Drosophila melanogaster CG5654-PA
protein.
Length = 352
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +3
Query: 279 R*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
R DVFVHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 84 REDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGP 131
Score = 64.9 bits (151), Expect = 6e-11
Identities = 39/94 (41%), Positives = 45/94 (47%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTKVRCVCASDCHRP*QPT*XXXXXXXXXXXXXXX 376
VIA KV+GTVKWFNVKSGYGFINRNDT+ P
Sbjct: 57 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDV 116
Query: 377 XXXXXXL*SSWCYWSPGGEPVKGSPYAADKRRGY 478
+ P GEPV+GS +AADKRR +
Sbjct: 117 VIGEKGN-EAANVTGPSGEPVRGSQFAADKRRNF 149
>U49120-1|AAB94634.1| 359|Drosophila melanogaster Y-box protein
protein.
Length = 359
Score = 76.6 bits (180), Expect = 2e-14
Identities = 39/48 (81%), Positives = 41/48 (85%)
Frame = +3
Query: 279 R*DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGP 422
R DVFVHQ+AIA NNP+KAVRSVGDGE VEF VV GEKG EAA VTGP
Sbjct: 85 REDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGP 131
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 197 VIAEKVSGTVKWFNVKSGYGFINRNDTK 280
VIA KV+GTVKWFNVKSGYGFINRNDT+
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTR 85
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 422 PGGEPVKGSPYAADKRRGY 478
P GEPV+GS +AADKRR +
Sbjct: 131 PSGEPVRGSQFAADKRRNF 149
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.95
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 218 GTVKWFNVKSGYGFINRND 274
G KWFNV G+GF+ ND
Sbjct: 41 GKCKWFNVAKGWGFLTPND 59
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.95
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 218 GTVKWFNVKSGYGFINRND 274
G KWFNV G+GF+ ND
Sbjct: 41 GKCKWFNVAKGWGFLTPND 59
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 31.1 bits (67), Expect = 0.95
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 218 GTVKWFNVKSGYGFINRND 274
G KWFNV G+GF+ ND
Sbjct: 41 GKCKWFNVAKGWGFLTPND 59
>BT024236-1|ABC86298.1| 959|Drosophila melanogaster LD10772p
protein.
Length = 959
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 422 PGGEPVKGSPYAADKRRGYHRQYFPRQG 505
PG EP++G+P + KRR Q P G
Sbjct: 655 PGQEPLEGTPTPSKKRRKSRTQISPESG 682
>AY119108-1|AAM50968.1| 647|Drosophila melanogaster RE09079p
protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 422 PGGEPVKGSPYAADKRRGYHRQYFPRQG 505
PG EP++G+P + KRR Q P G
Sbjct: 343 PGQEPLEGTPTPSKKRRKSRTQISPESG 370
>AE014297-360|AAF51949.1| 959|Drosophila melanogaster CG10979-PA
protein.
Length = 959
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 422 PGGEPVKGSPYAADKRRGYHRQYFPRQG 505
PG EP++G+P + KRR Q P G
Sbjct: 655 PGQEPLEGTPTPSKKRRKSRTQISPESG 682
>AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p protein.
Length = 1916
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 500 DEGNIGGGSHGACLQHKVSLLLAHHPGTSNTSCFKAFLPGNHG 372
D +IG G HG + L H PG +T F F PG G
Sbjct: 1027 DSESIGSGVHGG---YGGFLQSNHMPGNRHTQLFPTFGPGGRG 1066
>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
isoform protein.
Length = 1299
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Frame = -3
Query: 437 LAHHP--GTSNTSCFKAFLPGNHGKLHRLSVAD-----RAHSLTWVVTG 312
L HHP GTS+ S FL G H + R S +D TWV G
Sbjct: 492 LLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPG 540
>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
isoform protein.
Length = 1029
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Frame = -3
Query: 437 LAHHP--GTSNTSCFKAFLPGNHGKLHRLSVAD-----RAHSLTWVVTG 312
L HHP GTS+ S FL G H + R S +D TWV G
Sbjct: 222 LLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPG 270
>AJ243708-1|CAB57344.3| 963|Drosophila melanogaster prickle pk
isoform protein.
Length = 963
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Frame = -3
Query: 437 LAHHP--GTSNTSCFKAFLPGNHGKLHRLSVAD-----RAHSLTWVVTG 312
L HHP GTS+ S FL G H + R S +D TWV G
Sbjct: 156 LLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPG 204
>AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB,
isoform B protein.
Length = 1916
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 500 DEGNIGGGSHGACLQHKVSLLLAHHPGTSNTSCFKAFLPGNHG 372
D +IG G HG + L H PG +T F F PG G
Sbjct: 1027 DSESIGSGVHGG---YGGFLQSNHMPGNRHTQLFPTFGPGGRG 1066
>AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA,
isoform A protein.
Length = 1916
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 500 DEGNIGGGSHGACLQHKVSLLLAHHPGTSNTSCFKAFLPGNHG 372
D +IG G HG + L H PG +T F F PG G
Sbjct: 1027 DSESIGSGVHGG---YGGFLQSNHMPGNRHTQLFPTFGPGGRG 1066
>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
isoform C protein.
Length = 1299
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Frame = -3
Query: 437 LAHHP--GTSNTSCFKAFLPGNHGKLHRLSVAD-----RAHSLTWVVTG 312
L HHP GTS+ S FL G H + R S +D TWV G
Sbjct: 492 LLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPG 540
>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
isoform B protein.
Length = 1029
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Frame = -3
Query: 437 LAHHP--GTSNTSCFKAFLPGNHGKLHRLSVAD-----RAHSLTWVVTG 312
L HHP GTS+ S FL G H + R S +D TWV G
Sbjct: 222 LLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPG 270
>AE013599-308|AAM68908.1| 963|Drosophila melanogaster CG11084-PA,
isoform A protein.
Length = 963
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Frame = -3
Query: 437 LAHHP--GTSNTSCFKAFLPGNHGKLHRLSVAD-----RAHSLTWVVTG 312
L HHP GTS+ S FL G H + R S +D TWV G
Sbjct: 156 LLHHPAGGTSSASAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPG 204
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,575,641
Number of Sequences: 53049
Number of extensions: 396478
Number of successful extensions: 1102
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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