Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_D24
         (311 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...   113   3e-26
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...   113   3e-26
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P...    27   6.5  
BT011045-1|AAR31116.1|   74|Drosophila melanogaster RH73694p pro...    26   8.5  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score =  113 bits (273), Expect = 3e-26
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +3

Query: 51  MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 230
           MPREIK++KDFL KARR DA++VKIKKNP N KFK+RCSRFLYTLV+ DKEKA+K+KQSL
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSL 60

Query: 231 PPG 239
           PPG
Sbjct: 61  PPG 63


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score =  113 bits (273), Expect = 3e-26
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +3

Query: 51  MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 230
           MPREIK++KDFL KARR DA++VKIKKNP N KFK+RCSRFLYTLV+ DKEKA+K+KQSL
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSL 60

Query: 231 PPG 239
           PPG
Sbjct: 61  PPG 63


>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
            protein.
          Length = 1833

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 66   KDIKDFLIKARRKDAKSVK-IKKNPENVKFKVRCSRFLY 179
            K+IKD   KA + D+K V+ +KK  E V+  +   +  Y
Sbjct: 1074 KEIKDLKTKASKSDSKQVQDLKKQVEEVQASLSAEQKRY 1112


>BT011045-1|AAR31116.1|   74|Drosophila melanogaster RH73694p
           protein.
          Length = 74

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 303 VIFYFFYFINLVTSLYFF 250
           V+FYFFYF  + TS+  F
Sbjct: 33  VVFYFFYFCFIATSVIGF 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,814,864
Number of Sequences: 53049
Number of extensions: 192437
Number of successful extensions: 572
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)