Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D22
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 256 3e-69
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 124 1e-29
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 122 3e-29
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 122 6e-29
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 111 6e-26
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 101 7e-23
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 99 3e-22
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 57 2e-09
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 40 4e-04
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 39 5e-04
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.1
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 27 3.1
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 4.1
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 26 5.5
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 25 7.2
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 25 9.5
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 25 9.5
SPAC23A1.14c |||cystathionine gamma-synthase |Schizosaccharomyce... 25 9.5
SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces p... 25 9.5
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 256 bits (626), Expect = 3e-69
Identities = 116/176 (65%), Positives = 145/176 (82%)
Frame = +3
Query: 126 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 305
MF+TRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+ T + VVL VEKR+TS LME
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 306 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 485
++EK+ E+D HI CA+SGL AD+RT++E ARV+ QNH F Y+E +ES Q++ +LA
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 486 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSE 653
++FG+ +D MSRPFGVA++ AGIDE GPQL+H +PSGT+ +Y+AKAIGSGSE
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSE 176
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 124 bits (299), Expect = 1e-29
Identities = 66/170 (38%), Positives = 101/170 (59%), Gaps = 1/170 (0%)
Frame = +3
Query: 144 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 323
+Y + TFSP G+L Q+EYA+ A+ G T++GI ++GVVLA EK+ TS L ++EK
Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEK 63
Query: 324 IVEVDRHIACAVSGLMADSRTLVERARVECQNHW-FVYNERMSVESCAQAVSNLAIQFGD 500
+ + I SG+ D R LV+++R Q + +YNE + Q ++++ +
Sbjct: 64 VCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASV---MQE 120
Query: 501 SDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGS 650
S G RPFGV+++ AG+DEKGP L+ +DPSGT+ + A AIG S
Sbjct: 121 STQSGGV---RPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSS 167
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 122 bits (295), Expect = 3e-29
Identities = 65/173 (37%), Positives = 104/173 (60%), Gaps = 2/173 (1%)
Frame = +3
Query: 141 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 320
S YDR ++ FSP+GRL QVEY EA++ G+TAI + +E +V+ VE++ L + +
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQ 61
Query: 321 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 500
KI VD H+ A +GL AD+R L+++ARVE QNH + +S+E + V+ + ++
Sbjct: 62 KIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQ 121
Query: 501 SDDDSGTAMSRPFGVAVMFAGID--EKGPQLFHMDPSGTFVQYDAKAIGSGSE 653
S G RPFGV+ + AG D + P+++ +P+G + + A AIG S+
Sbjct: 122 S---GGV---RPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASK 168
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 122 bits (293), Expect = 6e-29
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Frame = +3
Query: 132 LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME-P 308
++RS YD FSPEGRL+QVEYA+EAI A+GI +G+VLA EK++TS L+E
Sbjct: 1 MSRS-YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQE 59
Query: 309 TTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAI 488
+ EK+ + ++ CAV+GL AD+ L+ AR Q + +NE M E + V +L
Sbjct: 60 ESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQ 119
Query: 489 QFGDSDDDSGTAMSRPFGVAVMFAGIDE-KGPQLFHMDPSGTFVQYDAKAIGSGS 650
+ + RPFGV+ ++AG D +G QLF +PSG + + A +IG S
Sbjct: 120 GY------TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNS 168
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 111 bits (268), Expect = 6e-26
Identities = 64/169 (37%), Positives = 94/169 (55%)
Frame = +3
Query: 147 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 326
YD G+ FSP+GRLFQ EYA +A++ ST IGI +GV+LA+EK +TS L++P +I
Sbjct: 8 YDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRI 66
Query: 327 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 506
VDRHI A +G + D + +V+RAR E + Y + A + N F
Sbjct: 67 GSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---- 122
Query: 507 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSE 653
+ + RPFGV A D +GP L+ ++P+G + Y+ A G G +
Sbjct: 123 --TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQ 169
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 101 bits (243), Expect = 7e-23
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +3
Query: 147 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 323
+DR + FSPEGRL+QVEYA +A G T++G+ + +K++ L++ +T++
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 324 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 503
+ + + I C ++G +AD+R V RAR E + M + A+ ++N+A
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIA------ 120
Query: 504 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIG 641
+ A RP GVA+ +D++ GP LF +DP+G ++ Y A + G
Sbjct: 121 QVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAG 167
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 99 bits (238), Expect = 3e-22
Identities = 58/172 (33%), Positives = 92/172 (53%)
Frame = +3
Query: 138 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 317
R++YD T+SP+GRL QVEYA+EAIK GS +G+ + VL KR L +
Sbjct: 3 RNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL--SSYQ 60
Query: 318 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 497
+K++ +D HI A++GL D+R L + E + ++ + V + +S +A +
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVR---RLMSKVAEKAQ 117
Query: 498 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSE 653
+ + G RP+GV + G DE GP L PSG ++Y ++GS S+
Sbjct: 118 INTQEYG---RRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQ 166
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 57.2 bits (132), Expect = 2e-09
Identities = 36/143 (25%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Frame = +3
Query: 225 GSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERA 401
G+T + G+V+ V+ R ++ L+ T++K++E++ ++ ++G AD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 402 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP 581
+EC+ H E +SV + ++ +SN+ + G +S + M AG + G
Sbjct: 121 GMECRLHQLRNKELISVSAASKILSNITYSY------KGYGLS----MGTMLAGTGKGGT 170
Query: 582 QLFHMDPSGTFVQYDAKAIGSGS 650
L+++D GT ++ D ++GSGS
Sbjct: 171 ALYYIDSDGTRLKGDLFSVGSGS 193
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 39.5 bits (88), Expect = 4e-04
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Frame = +3
Query: 210 EAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRT 386
+A G+T +G+ + +VL + R T+ ++ +K+ + +I CA +G AD+
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 387 LVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGI 566
+ + H N + V + + ++ G ++ G
Sbjct: 90 VTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRY-----------QGHIGAYLVLGGY 138
Query: 567 DEKGPQLFHMDPSGTFVQYDAKAIGSGS 650
D KGP LF + G+ + A+GSGS
Sbjct: 139 DCKGPHLFTIAAHGSSDKLPYVALGSGS 166
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 39.1 bits (87), Expect = 5e-04
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 216 IKLGSTAIGICTSEGVVLAVEKRIT-STLMEPTTIEKIVEVDRHIACAVSGLMADSRTLV 392
I++G+T + +GV+LA + R T + +K+ ++ +I C SG AD++T+
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVA 80
Query: 393 ERARVECQNHWFVYNERMSVESCAQAVSNLAIQ 491
+ + + + SV + A S + Q
Sbjct: 81 DLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQ 113
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/81 (30%), Positives = 31/81 (38%)
Frame = -3
Query: 425 PVVLTFNSGPFN*GPGVGHQTRNGASDVSIYFNNLFDGRGFHQS*SYPLLHGQNNSLRST 246
P+ L F S F G S +S YF NLF + Y LL G+NN+ +
Sbjct: 148 PLTLRFKS-IFQSGVATQDLDVQWVSSISWYFLNLFGLKSV-----YALLLGENNAASNA 201
Query: 245 NANCSGAKFDSFYGIFHLEQP 183
A F S L QP
Sbjct: 202 TNEMGMAGFSSAAATAQLIQP 222
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -2
Query: 636 WPWHHTAQMYHSGPYETVEGLSHQCLQT*QQHQMAVTWLFR 514
+PW+ T+ + P +V G+S +C + Q A+ L +
Sbjct: 201 FPWNKTSSTFELDPTISVSGMSDECFASIVQKFSAIGGLIK 241
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 559 ANITATPNGRDMAVPLSSSLS-PNCIAKLETA 467
+ +TATP+ + PLSS S PN I+ L T+
Sbjct: 345 STLTATPSSLENLYPLSSRRSVPNLISSLGTS 376
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 429 QTSGSDIQLGPFQLRSWSRPSDPKRRKRCV 340
+T+ D++ PF L +W P+DPK K +
Sbjct: 12 ETAEIDVKEDPF-LVTWQSPTDPKNPKNWI 40
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = -1
Query: 199 STWNSLPSGLNVLTPRSYSERVRNILLLRYSR 104
++WN++PSG N L+ + ++ ++ L +S+
Sbjct: 521 ASWNNVPSGDNTLSTEALQDKKKSEELTAHSK 552
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 371 HQTRNGASDVSIYFNNLFDGRGFHQS*SYPLLHGQNNSLRSTNANCS 231
H T AS ++ Y N F FH +YP+ ++ S ST+AN S
Sbjct: 304 HPTHPSASAMN-YMNPCF--LEFHAFFNYPMKFARSRSAYSTSANYS 347
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 124 KCFSHVPSMIAASTHSAL 177
KCFS + + A ST+SAL
Sbjct: 562 KCFSEMSPLFACSTYSAL 579
>SPAC23A1.14c |||cystathionine gamma-synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 398
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 632 LGIILHKCTTRVHMKQLRAFLINACKHNSN 543
LG ILH + ++ LR F + KH+ N
Sbjct: 243 LGTILHPQQAFLLLRSLRTFPLRIAKHSEN 272
>SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 555 FAGIDEKGPQLFHMDPSGTFVQYDAKAIG 641
F + + P + M PSG +V D AIG
Sbjct: 331 FQAVSNRTPFIADMKPSGKYVMEDLFAIG 359
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,796,673
Number of Sequences: 5004
Number of extensions: 59762
Number of successful extensions: 179
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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