Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D22
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 250 9e-67
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 139 1e-33
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 113 1e-25
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 103 1e-22
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 91 6e-19
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 38 0.008
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 35 0.058
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 34 0.10
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 34 0.10
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm rece... 29 2.9
Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical pr... 29 3.8
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 250 bits (611), Expect = 9e-67
Identities = 119/176 (67%), Positives = 145/176 (82%)
Frame = +3
Query: 126 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 305
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEA+KLGST+IGI TSEGV+LA EKR TS LM
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 306 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 485
IEKI +VD+HI +GL+ADSRTLVERA++E QN WF YN ++ VE Q+V+NLA
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 486 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSE 653
+QFG DDD +MSRPFGVA++FAG+D++G +LFH+DPSGTF+ AK+IG+ S+
Sbjct: 121 LQFG--DDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASD 174
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 139 bits (337), Expect = 1e-33
Identities = 69/172 (40%), Positives = 105/172 (61%), Gaps = 1/172 (0%)
Frame = +3
Query: 141 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 320
+ YDR + FSP+G LFQVEYA EA+K GSTA+G+ + +V+ VEK+ L + TI
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIR 61
Query: 321 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 500
KI +D H+ A +GL AD+R LV+RAR+ECQ++ + ++V ++ ++N +F
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 501 SDDDSGTAMSRPFGVAVMFAGIDEKG-PQLFHMDPSGTFVQYDAKAIGSGSE 653
S RPFG++++ G D G P+LF +PSG + +Y A A G G +
Sbjct: 122 SPG------RRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEK 167
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 113 bits (272), Expect = 1e-25
Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Frame = +3
Query: 147 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI-EK 323
YD FSPEGRL+QVEYA+EAI T +GI +SEG+V+A E++ L++ + + EK
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 324 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 503
+ + +I+C V+G+ AD+ L+ R ++ Y E M VE Q V NL +
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE---QLVQNLC---NEK 118
Query: 504 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSE 653
+ RPFGV++++ G D+ G QL+ DPSG + + A IGS +
Sbjct: 119 QRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQ 169
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 103 bits (247), Expect = 1e-22
Identities = 56/172 (32%), Positives = 94/172 (54%)
Frame = +3
Query: 138 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 317
R++YD V +SP+GRL QVEYA+EA+K GS +GI + V+ KR + L
Sbjct: 3 RNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ-- 60
Query: 318 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 497
+K+ E+D H +++GL++D R L + EC + + Y + + ++ A+++ L +Q
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESM-QLKLQ-- 117
Query: 498 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSE 653
++ RPFGV ++ AG D+ G + DPS V +IG+ S+
Sbjct: 118 ---ANTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQ 166
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 102 bits (245), Expect = 2e-22
Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Frame = +3
Query: 147 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 326
Y + TFSP G+L Q+EYA+ A+K G ++G+ +GVVLA E + S L + K+
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE-NVGSVLTDDQ--PKV 61
Query: 327 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 506
++ +HI C SG+ D R LV++AR + +Y E M Q V+++A +
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPT---IQLVTDIAAVMQEYT 118
Query: 507 DDSGTAMSRPFGVAVMFAGIDEK--GPQLFHMDPSGTFVQYDAKAIG 641
G RPFG +++ AG D+ P LF DPSG + + A A+G
Sbjct: 119 QSGGV---RPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALG 162
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 91.1 bits (216), Expect = 6e-19
Identities = 48/167 (28%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Frame = +3
Query: 147 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTSEGVVLAVEKRITSTLMEPTTIEK 323
+DR + FSPEGR++QVEYA +AI + TA+ + ++ V+AV+KR+ +L+ T+
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 324 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 503
+ ++ + + C G++ D++ ++RA+ E + + M E A+ +++L +
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY--- 125
Query: 504 DDDSGTAMSRPFGVAVMFAGI-DEKGPQLFHMDPSGTFVQYDAKAIG 641
+ A R G A++F DEKGP+++ +DP+G + ++G
Sbjct: 126 ---TQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVG 169
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 83.0 bits (196), Expect = 2e-16
Identities = 54/166 (32%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Frame = +3
Query: 147 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 326
YD +TFSP+GR+FQVEYA +A+ T I I GVV+ +K I+S L ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 327 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 506
V+ ++ AV+G D L A E Y E M +++ A +V+
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI------- 120
Query: 507 DDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIG 641
+SRPFG F +++ G +LF ++PSG +Y A A+G
Sbjct: 121 HIHTLGISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVG 166
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = +3
Query: 258 GVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVY 434
G+++AV+ R +S + ++ KI+++ + ++G AD + C +
Sbjct: 82 GIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELRE 141
Query: 435 NERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTF 614
++V + ++ +N + G +S V M AG D+KGPQ+F +D G
Sbjct: 142 KTSITVSAASKYFANTLYGY------RGQGLS----VGSMVAGYDKKGPQIFKVDSEGDR 191
Query: 615 VQYDAKAIGSGS 650
Q ++GSGS
Sbjct: 192 CQLKVCSVGSGS 203
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 37.5 bits (83), Expect = 0.008
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Frame = +3
Query: 225 GSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKIV-EVDRHIACAVSGLMADSRTLVERA 401
G T + + E V +A + RI + T +K V +V + ++G +D+RT++E+
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 402 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKG- 578
+ N + + ++ +SNLA Q G+ + P + AG+D+
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQ-----HRFGSYFTEP-----LVAGLDDTNK 117
Query: 579 PQLFHMDPSG-TFVQYDAKAIGSGSE 653
P + MD G D A+G+G E
Sbjct: 118 PYICCMDTIGCVSAPRDFVAVGTGQE 143
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 34.7 bits (76), Expect = 0.058
Identities = 32/152 (21%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Frame = +3
Query: 201 YAIEAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMAD 377
Y E I G+T I + + GVV+ + R ++ + + KI + ++ SG AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 378 SRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMF 557
++ + + A+ + N+ +++ +Q + + +V+
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-----------LSASVLV 123
Query: 558 AGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGS 650
AG DE+ G Q++ + G + + A GSGS
Sbjct: 124 AGWDEELGGQVYAIPIGGFVSRQRSTASGSGS 155
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.10
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +3
Query: 225 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 398
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 399 ARVECQNHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK 575
+ + F Y MSV+ CA+ +S NL + P+ + AGIDE
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEH 159
Query: 576 GP-QLFHMDPSGTFVQYDAKAIGS 644
G +F DP G + A G+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGA 183
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.10
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +3
Query: 225 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 398
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 399 ARVECQNHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK 575
+ + F Y MSV+ CA+ +S NL + P+ + AGIDE
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEH 159
Query: 576 GP-QLFHMDPSGTFVQYDAKAIGS 644
G +F DP G + A G+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGA 183
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 540 GVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGS 650
G ++ G+D GP L+ +GT + + A GSGS
Sbjct: 141 GAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGS 177
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 102 HLEYRNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 275
H +Y+N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 276 EKRITSTLMEPTTIEKIVEVDRHIAC 353
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 102 HLEYRNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 275
H +Y+N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 276 EKRITSTLMEPTTIEKIVEVDRHIAC 353
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm
receptor protein 134 protein.
Length = 328
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 512 IIVTVSKLYS*VGNGLST*FYTHTLI-VHKPVVLTFNSGPFN*GPGVGH 369
+++T S LYS V N + TH L+ + K V + N GPF PG G+
Sbjct: 41 LMITFS-LYSVVYNYVD--IITHPLVLIEKQVFVVINHGPFRYTPGFGY 86
>Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical
protein C13C4.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 385 VLESAIR--PETAQAMCRSTSTIFSMVVGSIKVEVILFSTAKTT 260
++ AIR +TAQA +S T F + VG++ + VILF + T
Sbjct: 444 LISDAIRGNEDTAQAHYKSLVTSFWLCVGTLVLSVILFGISAIT 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,731,183
Number of Sequences: 27780
Number of extensions: 350149
Number of successful extensions: 960
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -