Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D18
(444 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 161 2e-40
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215... 161 3e-40
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835... 161 3e-40
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406... 156 9e-39
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426... 28 2.9
08_02_0625 + 19438768-19438889,19438897-19439065,19439131-194391... 28 3.9
05_05_0368 + 24449793-24451199,24451867-24451927,24452256-24452710 27 5.1
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13... 27 5.1
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036... 27 5.1
08_01_0455 + 4012857-4013735 27 6.8
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 161 bits (392), Expect = 2e-40
Identities = 71/110 (64%), Positives = 88/110 (80%)
Frame = +1
Query: 94 VKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKYMSS 273
+KPDGVQRGL+ I+ RFE+KGFKLV +K V PS+E Q+HY DL RPFF GL ++SS
Sbjct: 52 IKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNGLCDFLSS 111
Query: 274 GPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 423
GPV+ MVWEG V+K GR+++GAT+P S+PGTIRGDL + VGRNIIHGS
Sbjct: 112 GPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161
>12_02_0695 +
22220054-22220056,22221226-22221276,22221415-22221501,
22222064-22222144,22222241-22222353,22222482-22222531,
22222790-22222857
Length = 150
Score = 161 bits (390), Expect = 3e-40
Identities = 69/112 (61%), Positives = 88/112 (78%)
Frame = +1
Query: 88 LFVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKYM 267
+ +KPDGVQRGLVG II RFEKKGF L GLK ++L Q+HY DL +PFFPGL++Y+
Sbjct: 7 IMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGLIEYI 66
Query: 268 SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 423
+SGPVV M WEG VV + R+++GATNP ++PGTIRGDL +Q GRN++HGS
Sbjct: 67 TSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGS 118
>07_03_0445 -
18281715-18281832,18282274-18282505,18283486-18283534,
18283733-18283783
Length = 149
Score = 161 bits (390), Expect = 3e-40
Identities = 70/112 (62%), Positives = 89/112 (79%)
Frame = +1
Query: 88 LFVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKYM 267
+ +KPDGVQRGL+G II RFEKKGF L G+KF+ QQHY+DL+ +PFFPGLV+Y+
Sbjct: 6 IMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYI 65
Query: 268 SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 423
SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D ++VGRN+IHGS
Sbjct: 66 ISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGS 117
>10_08_0945 -
21738643-21738760,21740056-21740287,21740582-21740630,
21740720-21740776
Length = 151
Score = 156 bits (378), Expect = 9e-39
Identities = 66/112 (58%), Positives = 88/112 (78%)
Frame = +1
Query: 88 LFVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKYM 267
+ +KPDGVQRGL+G +I RFEKKGF L +K + + ++HY+DL+S+PFF GLV+Y+
Sbjct: 8 IMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGLVEYI 67
Query: 268 SSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 423
SGPVV MVWEG VV TGR+++GATNP ++PGTIRGD + +GRN+IHGS
Sbjct: 68 VSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGS 119
>01_06_0319 -
28441082-28441102,28441630-28441701,28442568-28442627,
28442918-28443105,28444300-28444327,28444880-28444907,
28444942-28445163,28445238-28445409,28446224-28447468,
28447573-28447741,28447820-28448045,28449096-28449451,
28449530-28449724,28450655-28450864,28451729-28452004
Length = 1155
Score = 28.3 bits (60), Expect = 2.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 326 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRS--SSDGHTNFKPTSLKP 156
RP S+T + P+ +RPGK+G DA+S+ S S T +P S KP
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESVPGTNGSDLSQTDDTEARPCSKKP 587
>08_02_0625 +
19438768-19438889,19438897-19439065,19439131-19439174,
19439431-19440061
Length = 321
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -1
Query: 438 DSTLSRTMDDVTPNLNAEITADSAGLRVSWVSCAKHLTASLH 313
DST+ T D +TP+LN +T +A +R+ V+ + +S++
Sbjct: 57 DSTMYSTEDFLTPSLNCYVT--NAYIRIDKVTAVASIDSSIY 96
>05_05_0368 + 24449793-24451199,24451867-24451927,24452256-24452710
Length = 640
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 325 RQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSGQ 429
R + GA PA ++PGT + C+ R + G G+
Sbjct: 532 RSIGGAARPATAKPGTAQWRQCVAWWRRCMAGGGR 566
>03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-132773,
132883-132996,133065-133193,133293-133469,133555-133746,
134844-134981,135327-135559,135900-136003,136633-136727,
136817-137053,137801-137922,138252-138354,138750-138826,
138909-139017,139107-139253,139953-140000,140292-140492,
140589-140738,140917-141002,141088-141193,141278-141373,
141759-141911,142647-142819,142923-142986,144056-144193,
144548-144595,144690-144836,144907-144968,146540-146645,
147357-147461,147548-147679,147765-147974,148070-148171,
148261-148398
Length = 1729
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 229 PNRCSVAGEVLLMAIRISNR 170
PN+CS+ ++LL+A+RI R
Sbjct: 1388 PNKCSLLPKILLVAVRIIQR 1407
>01_06_0986 -
33602714-33602741,33603037-33603146,33603401-33603601,
33604605-33604697,33604937-33605182,33606007-33606372,
33606459-33606599,33607170-33607526
Length = 513
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 229 ASRPFFPGLVKYMSSGPVVP 288
ASRPF PGL++ PV+P
Sbjct: 22 ASRPFLPGLLEAALRAPVLP 41
>08_01_0455 + 4012857-4013735
Length = 292
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 148 RNVQ*WCPQDHVVHHQA 98
R V WCPQD V+ H+A
Sbjct: 166 RCVATWCPQDRVLRHRA 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,581,793
Number of Sequences: 37544
Number of extensions: 247922
Number of successful extensions: 565
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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