Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_D18
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   166   7e-42
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    54   5e-08
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    38   0.002
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   4.6  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   6.1  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  166 bits (403), Expect = 7e-42
 Identities = 76/119 (63%), Positives = 90/119 (75%)
 Frame = +1

Query: 67  NNVSVLLLFVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 246
           +N     + +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFF
Sbjct: 2   SNTERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFF 61

Query: 247 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 423
           P L++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD CIQ GRNI HGS
Sbjct: 62  PSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGS 120


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 54.0 bits (124), Expect = 5e-08
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +1

Query: 235 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLG 339
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILG 67


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 38.3 bits (85), Expect = 0.002
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
 Frame = +1

Query: 70  NVSVLLLFVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFF 246
           N    L+ +KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+
Sbjct: 8   NALKFLVVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFY 67

Query: 247 PGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSG 426
             LV+++SSGPV+ M   G      G   L        QP  IR    +   RN+ H S 
Sbjct: 68  DRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASD 125

Query: 427 Q 429
           +
Sbjct: 126 E 126


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 202 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 297
           LL + + ++ S   +PG V+++   P++P  W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 123 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 209
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical
           protein T23F1.7b protein.
          Length = 799

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 220 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 378
           SDL S  +      +  +  VV   WEG+ +V+ G  R + G  N A+  P   R
Sbjct: 66  SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120


>Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical
           protein T23F1.7a protein.
          Length = 779

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 220 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 378
           SDL S  +      +  +  VV   WEG+ +V+ G  R + G  N A+  P   R
Sbjct: 66  SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +1

Query: 229  ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPADSQPGTI 375
            AS  F      Y+    V+  VW G    +T  Q +   GATN  D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,393,506
Number of Sequences: 27780
Number of extensions: 204944
Number of successful extensions: 454
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)