Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D12
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0310 - 16669565-16669822,16670558-16670794 158 2e-39
03_01_0290 + 2246791-2247027,2248089-2248346 158 2e-39
01_06_1794 - 39919363-39920025 29 2.0
03_05_0902 + 28643395-28643708,28643830-28643921,28644342-286444... 29 2.6
02_01_0391 + 2838471-2838794,2838892-2839028,2841155-2841631,284... 29 2.6
05_03_0657 + 16694833-16694963,16695567-16695684,16696280-166963... 29 3.4
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 3.4
02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599 28 4.5
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 28 6.0
11_01_0258 + 1978191-1978404,1978464-1978693,1979601-1979966 27 7.9
08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230... 27 7.9
07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125 27 7.9
03_06_0467 + 34145126-34145187,34145403-34145759,34146161-341462... 27 7.9
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 27 7.9
02_02_0353 + 9276316-9276518,9276915-9277314 27 7.9
02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18... 27 7.9
>10_08_0310 - 16669565-16669822,16670558-16670794
Length = 164
Score = 158 bits (384), Expect = 2e-39
Identities = 72/130 (55%), Positives = 97/130 (74%)
Frame = +2
Query: 101 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 280
LFAR FR G IPL+TY++ YK+G+ VD++ NGAV KGMPHK YHG+TGRV+NVT A+G
Sbjct: 14 LFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIG 73
Query: 281 VIVNKRVCGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVXLKRQPA 460
V +NK+V RII KRI++RVEHV+ S+C ++F R +N++L +AKA G+ + KRQP
Sbjct: 74 VEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQ 133
Query: 461 PPKAAHIVSG 490
PK +V G
Sbjct: 134 GPKPGFMVEG 143
>03_01_0290 + 2246791-2247027,2248089-2248346
Length = 164
Score = 158 bits (384), Expect = 2e-39
Identities = 72/130 (55%), Positives = 96/130 (73%)
Frame = +2
Query: 101 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 280
LFAR FR G IPL+TY++ YK+GD VD++ NGAV KGMPHK YHG+TGRV+NVT A+G
Sbjct: 14 LFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIG 73
Query: 281 VIVNKRVCGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVXLKRQPA 460
V +NK+V RII KRI++RVEHV+ S+C ++ R +N++L +AKA G+ + KRQP
Sbjct: 74 VEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAKARGEVISTKRQPE 133
Query: 461 PPKAAHIVSG 490
PK +V G
Sbjct: 134 GPKPGFMVEG 143
>01_06_1794 - 39919363-39920025
Length = 220
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +2
Query: 383 RVKENERLLKEAKAAGKTVXLKRQPAPPKAAHIVSGTEKPVLLAA 517
R ++ ++ EA AAG KRQP PP SG AA
Sbjct: 27 RQQQQQQQQYEAAAAGDKTSAKRQPPPPSRLKKTSGRNDDAATAA 71
>03_05_0902 +
28643395-28643708,28643830-28643921,28644342-28644443,
28645135-28645185,28645267-28645328,28645664-28645754,
28645911-28645975,28646053-28646247,28646346-28646465,
28646630-28646700,28646839-28647064,28647474-28647524,
28647629-28647857,28648140-28648279,28648527-28648652
Length = 644
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = -1
Query: 334 DIDALRYNPSADTLVDNHTESVSSNV---VHATCLSMVYFVWHTLLNCTIASDVYNVSNF 164
D A P+ D DNH + SNV ++ C ++ + +++C + N+ N
Sbjct: 535 DKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCETLRNTIPKAVVHCQVKEAKRNLLNR 594
Query: 163 VHFHVRGERNSSMCA 119
+ HV + + A
Sbjct: 595 FYAHVGSKEKKQLSA 609
>02_01_0391 +
2838471-2838794,2838892-2839028,2841155-2841631,
2841719-2841999,2843009-2843051,2844094-2844148,
2845771-2845824,2846282-2846314,2846574-2846621,
2846885-2846950,2847286-2847426
Length = 552
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 358 GVLDMLNTDIDAL-RYNPSADTLVDNHTESVSSNVVHATCLSMVYFVWHTLLNCTIASDV 182
GV+++ ++ +A RYN +A L + TESV S + C++ + + + T
Sbjct: 239 GVIEIPYSEEEACCRYNETASILKELITESVGSEAIGVDCIADFRRLLRQMESMTSVCQE 298
Query: 181 YNVSN 167
Y +SN
Sbjct: 299 YIISN 303
>05_03_0657 + 16694833-16694963,16695567-16695684,16696280-16696376,
16700126-16700232,16700473-16700595,16700791-16700944,
16701237-16701297,16701417-16701781,16701875-16703483,
16703697-16703940
Length = 1002
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 293 KRVCGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVXLKRQ-----P 457
+++C R+I + + + +H + Q+ KR++E L E +A G T L Q
Sbjct: 811 EKICERVIESHMLQKDDLTEHYEAMQNVRKRLRE---LCAEYQATGPTARLFNQRGSSKN 867
Query: 458 APPKAAHIVSGTEKP 502
+P + +IVSG P
Sbjct: 868 SPRQLINIVSGRWSP 882
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 161 YKVGDIVDIRGNGAVQKGMPHKVY 232
++ GDI+ I G+G+V K PH++Y
Sbjct: 623 FEDGDIIVIWGDGSVSKVGPHEIY 646
>02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599
Length = 99
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 347 VKHSKCRQDFLKRVKENERLLKEAKAAGKTVXLKRQ 454
++ +KCRQD++ VK++ +L+++ A K KRQ
Sbjct: 1 MRQAKCRQDYMAIVKQSRQLIEKLDA--KNEPKKRQ 34
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 187 QRQW-CS--SKGYATQSIPWKDRSRVQRYCSRSRCDCQQACLRKDYTEAHQYPC 339
+++W C SK YA QS WK +++ RCDC RKD H+ C
Sbjct: 139 EKKWKCDRCSKKYAVQS-DWKAHTKICG-TKEYRCDCGTIFSRKDSFITHRAFC 190
>11_01_0258 + 1978191-1978404,1978464-1978693,1979601-1979966
Length = 269
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 452 QPAPPKAAHIVSGTEKPVLLAAYPH 526
QP P + A +V TE VL A PH
Sbjct: 46 QPPPIRGARVVENTEPNVLFAYTPH 70
>08_01_0283 -
2304024-2304111,2304224-2304343,2304594-2304715,
2304824-2305096,2305454-2305558,2305635-2305851,
2306012-2306262,2306518-2306724,2307087-2307351,
2308655-2308749
Length = 580
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 169 WRHCRHQRQWCSSKGYATQSIPWKDRSRV 255
W H QW YAT+ I W+ R+ V
Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALV 563
>07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125
Length = 790
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 426 PARPSX*RDSQLPLKLPTSSVELRNPSYLPPIP 524
P RP D L +L + + NP LPP+P
Sbjct: 71 PPRPDSPADDDLARRLAAAVLSSPNPGSLPPLP 103
>03_06_0467 +
34145126-34145187,34145403-34145759,34146161-34146248,
34146361-34146506,34146892-34146936,34147030-34147133,
34147225-34147361,34147651-34147761,34148455-34148664
Length = 419
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 417 PRLPARPSX*RDSQLPLKLPTSSVELRNPSYLP 515
P L RP R P+ PT + +++ PS+LP
Sbjct: 347 PNLQERPMDRRPELGPMPFPTQAWQMQAPSHLP 379
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 312 LYRSASISVLSMSSTPSADKTSLRESKRM 398
+Y+SA++ V + SS P+ADK + + ++M
Sbjct: 410 VYKSANLQVSNSSSIPAADKQTRQTMRQM 438
>02_02_0353 + 9276316-9276518,9276915-9277314
Length = 200
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 172 RHCRHQRQWCSSKGYATQSIPWKDRSRVQRYCSRSRC 282
RH R +R+WC S P R+ R R+RC
Sbjct: 161 RHRRRRRRWCPSSSPRRSPAPPPGRACKGRRGGRTRC 197
>02_01_0030 -
183836-183903,183986-184453,184526-184604,184698-185183
Length = 366
Score = 27.5 bits (58), Expect = 7.9
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = +2
Query: 116 FRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNK 295
F T G IP Y+ G + + +G + G PHK+ R+Y++ + A+G +
Sbjct: 114 FSTDGEIP-------YREGQSIGVIPDGIDKNGKPHKL------RLYSIASSAIGDFADS 160
Query: 296 RVCGRIIPKRI--NIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVXLKRQPAPPK 469
+ + + + N + E VK C +FL +K + K G P P
Sbjct: 161 KTVSLCVKRLVYTNDQGEIVK-GVC-SNFLCDLKPG----SDVKITGPVGKEMLMPKDPN 214
Query: 470 AAHIVSGT 493
A I+ GT
Sbjct: 215 ATIIMLGT 222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,835,551
Number of Sequences: 37544
Number of extensions: 297107
Number of successful extensions: 1046
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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