Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D09
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160939-1|AAD46879.1| 422|Drosophila melanogaster BcDNA.LD1893... 107 2e-23
AF145309-1|AAF08390.1| 422|Drosophila melanogaster 26S proteaso... 107 2e-23
AE013599-1944|AAF58212.1| 422|Drosophila melanogaster CG10149-P... 107 2e-23
AE013599-1943|AAF58213.2| 439|Drosophila melanogaster CG10149-P... 107 2e-23
>AF160939-1|AAD46879.1| 422|Drosophila melanogaster BcDNA.LD18931
protein.
Length = 422
Score = 107 bits (256), Expect = 2e-23
Identities = 58/124 (46%), Positives = 70/124 (56%)
Frame = +2
Query: 281 KRKGRLRSWQNLSKPPDHF*AS*VKLKLRNWYVPLXDFFLDLEAGIGIEVQLCKECIEWA 460
K++G+ + +L K F +S K K L D FLD++AG GIEVQLCK+CIEWA
Sbjct: 58 KQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWA 117
Query: 461 KEERRTFLRQSLEARLIALYFDTGMYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTY 640
K+E+RTFLRQSLEARLIALYFDT +Y SKTY
Sbjct: 118 KQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTY 177
Query: 641 HALS 652
HALS
Sbjct: 178 HALS 181
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/92 (52%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 112 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 288
MAGA LFER++ SS NR+E D + +K+V E E+DEE IR KEQGIL
Sbjct: 1 MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60
Query: 289 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
TRPFLS ISKAKAAKLVRSL
Sbjct: 61 GKAKELADLIKVTRPFLSSISKAKAAKLVRSL 92
>AF145309-1|AAF08390.1| 422|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p42B protein.
Length = 422
Score = 107 bits (256), Expect = 2e-23
Identities = 58/124 (46%), Positives = 70/124 (56%)
Frame = +2
Query: 281 KRKGRLRSWQNLSKPPDHF*AS*VKLKLRNWYVPLXDFFLDLEAGIGIEVQLCKECIEWA 460
K++G+ + +L K F +S K K L D FLD++AG GIEVQLCK+CIEWA
Sbjct: 58 KQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWA 117
Query: 461 KEERRTFLRQSLEARLIALYFDTGMYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTY 640
K+E+RTFLRQSLEARLIALYFDT +Y SKTY
Sbjct: 118 KQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTY 177
Query: 641 HALS 652
HALS
Sbjct: 178 HALS 181
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/92 (52%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 112 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 288
MAGA LFER++ SS NR+E D + +K+V E E+DEE IR KEQGIL
Sbjct: 1 MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60
Query: 289 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
TRPFLS ISKAKAAKLVRSL
Sbjct: 61 GKAKELADLIKVTRPFLSSISKAKAAKLVRSL 92
>AE013599-1944|AAF58212.1| 422|Drosophila melanogaster CG10149-PB,
isoform B protein.
Length = 422
Score = 107 bits (256), Expect = 2e-23
Identities = 58/124 (46%), Positives = 70/124 (56%)
Frame = +2
Query: 281 KRKGRLRSWQNLSKPPDHF*AS*VKLKLRNWYVPLXDFFLDLEAGIGIEVQLCKECIEWA 460
K++G+ + +L K F +S K K L D FLD++AG GIEVQLCK+CIEWA
Sbjct: 58 KQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWA 117
Query: 461 KEERRTFLRQSLEARLIALYFDTGMYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTY 640
K+E+RTFLRQSLEARLIALYFDT +Y SKTY
Sbjct: 118 KQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTY 177
Query: 641 HALS 652
HALS
Sbjct: 178 HALS 181
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/92 (52%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 112 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 288
MAGA LFER++ SS NR+E D + +K+V E E+DEE IR KEQGIL
Sbjct: 1 MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60
Query: 289 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
TRPFLS ISKAKAAKLVRSL
Sbjct: 61 GKAKELADLIKVTRPFLSSISKAKAAKLVRSL 92
>AE013599-1943|AAF58213.2| 439|Drosophila melanogaster CG10149-PA,
isoform A protein.
Length = 439
Score = 107 bits (256), Expect = 2e-23
Identities = 58/124 (46%), Positives = 70/124 (56%)
Frame = +2
Query: 281 KRKGRLRSWQNLSKPPDHF*AS*VKLKLRNWYVPLXDFFLDLEAGIGIEVQLCKECIEWA 460
K++G+ + +L K F +S K K L D FLD++AG GIEVQLCK+CIEWA
Sbjct: 75 KQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWA 134
Query: 461 KEERRTFLRQSLEARLIALYFDTGMYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKTY 640
K+E+RTFLRQSLEARLIALYFDT +Y SKTY
Sbjct: 135 KQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTY 194
Query: 641 HALS 652
HALS
Sbjct: 195 HALS 198
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/92 (52%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 112 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 288
MAGA LFER++ SS NR+E D + +K+V E E+DEE IR KEQGIL
Sbjct: 18 MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 77
Query: 289 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSL 384
TRPFLS ISKAKAAKLVRSL
Sbjct: 78 GKAKELADLIKVTRPFLSSISKAKAAKLVRSL 109
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,751,190
Number of Sequences: 53049
Number of extensions: 581990
Number of successful extensions: 1588
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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