Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_D06
         (472 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48717-10|CAA88612.2|  423|Caenorhabditis elegans Hypothetical p...    29   1.3  
Z48584-9|CAA88478.2|  423|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p...    27   5.1  
Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z48717-10|CAA88612.2|  423|Caenorhabditis elegans Hypothetical
           protein ZK1321.4 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 197 QNYFG-HFGVCTGTQHQTVPPSNTTQAEGQTESWH 298
           QN FG HFG  +G   + +  +NT+ +  Q+ ++H
Sbjct: 135 QNNFGSHFGTGSGVNQRNITNTNTSSSNHQSSTFH 169


>Z48584-9|CAA88478.2|  423|Caenorhabditis elegans Hypothetical
           protein ZK1321.4 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 197 QNYFG-HFGVCTGTQHQTVPPSNTTQAEGQTESWH 298
           QN FG HFG  +G   + +  +NT+ +  Q+ ++H
Sbjct: 135 QNNFGSHFGTGSGVNQRNITNTNTSSSNHQSSTFH 169


>Z83231-3|CAB05751.1|  247|Caenorhabditis elegans Hypothetical
           protein F57G9.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 106 KYNCISRSVCLDFVHFNVDCWCNFNVRAW 20
           KY  ++ SV ++F HF + CW N +   W
Sbjct: 150 KYTILAFSVIMEFYHFYMCCW-NISSNLW 177


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 81  TDLEMQLYFYFFLS*KSYCFFLFTESLTNLIFGSLLNYF 197
           TD E++LYFY+  +      +  T S+ +L F  L++YF
Sbjct: 107 TDCEVELYFYYLTN------YFSTYSVFSLTFDRLISYF 139


>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
           protein F23B2.11 protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 183 LLNYFKIILDILEFVRALNIR 245
           LLN  +++ D+ EF++A+NIR
Sbjct: 667 LLNSLQMLYDLAEFIKAVNIR 687


>Z83220-1|CAB05700.2|  440|Caenorhabditis elegans Hypothetical
           protein C34B7.1 protein.
          Length = 440

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 398 LCDVLNVLGHFNAKLIVAVKIKL-ICCEFCDFLGSAKIQSAPPLVLCLRVELSDVEC 231
           LC+V N +   N++  V +   + +C  +C+   +  I    PLV C   E SD +C
Sbjct: 185 LCEVRNTV---NSRYFVKICNDVNLCNNYCNPGQTPPIPQRQPLVRCYDCESSDSDC 238


>Z79752-4|CAB02083.1| 1188|Caenorhabditis elegans Hypothetical
           protein D2005.4 protein.
          Length = 1188

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +3

Query: 342 DCNY*FRVEMAENVEDITKNISELTVLSFRKLDDVXKAGKTLY 470
           DC+     E +E  ED TK  +ELTV+S     D      TL+
Sbjct: 2   DCDSGMIAEQSEIQEDSTKQAAELTVVSSVSEVDQENVKNTLH 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,729,273
Number of Sequences: 27780
Number of extensions: 178033
Number of successful extensions: 605
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)