Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_D03
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 64 2e-11
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 63 3e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 52 7e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 42 1e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 41 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 3e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 39 7e-04
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 38 0.002
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 38 0.002
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 37 0.003
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.11
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 28 1.0
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 28 1.0
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 1.8
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.8
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 2.4
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 27 3.1
SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce... 27 3.1
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 27 3.1
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 4.1
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 26 4.1
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 26 4.1
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 5.5
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 7.2
SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr 2|||M... 25 7.2
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 25 7.2
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|... 25 7.2
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 25 9.5
SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce... 25 9.5
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 63.7 bits (148), Expect = 2e-11
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +3
Query: 348 QNLKRHMQKKHIQGINNYCCEH--CKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITH 521
+N K + NY C C K F + L+SHM HT + F+C+ C K F
Sbjct: 553 ENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQ 612
Query: 522 YEKRKHMRCH---KIYICEECKKQFDKYNDFQKHKKDMIPKN 638
++KR+H + H K + C C ++F + + +H K + +N
Sbjct: 613 HDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQN 654
Score = 50.0 bits (114), Expect = 3e-07
Identities = 27/83 (32%), Positives = 37/83 (44%)
Frame = +3
Query: 129 CTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLKIKTDVI 308
CTF GC F+R + L H+ TH N R F+ RH+ +H IK
Sbjct: 572 CTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQ-LHTGIKA--- 627
Query: 309 YSCPECMQVFANRQNLKRHMQKK 377
++C C Q FA L RH + +
Sbjct: 628 FACVTCNQRFARMDALNRHYKSE 650
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 63.3 bits (147), Expect = 3e-11
Identities = 59/187 (31%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Frame = +3
Query: 114 KKVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAF--RXXXXXXXXXXXXHLIRHDNTVHL 287
KK+ C + C +SRP L QHL TH N R F HL H H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHT 78
Query: 288 KIKTDVIYSC--PECMQVFANRQNLKRHMQKKHIQGINNYCC--EHCKKYFRKINQLRSH 455
+K +SC C F +Q+L+RH++ + Y C E C + F K QLRSH
Sbjct: 79 NVKP---FSCHYDGCDAQFYTQQHLERHIEVH--RKPKPYACTWEGCDECFSKHQQLRSH 133
Query: 456 MYQ-HTGIKSFKC--NKCFKEFITHYEKRKHM-RCH-KI--YIC--EEC--KKQFDKYND 602
+ HT + + C C F T + + H+ R H KI Y C E C + F+K++
Sbjct: 134 ISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQ 193
Query: 603 FQKHKKD 623
Q H ++
Sbjct: 194 LQNHIRE 200
Score = 49.6 bits (113), Expect = 4e-07
Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 17/183 (9%)
Frame = +3
Query: 117 KVHKCTFNGCTTAFSRPFRLTQHLL---THVNVRAFRXXXXXXXXXXXXHLIRHDNTVHL 287
K + CT+ GC FS+ +L H+ TH+ L H N H
Sbjct: 111 KPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHE 170
Query: 288 KIKTDVIYSCPE--CM--QVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSH 455
KI + YSCP C+ + F L+ H+++ H+ C C + F+ LR H
Sbjct: 171 KI---ISYSCPHESCVGHEGFEKWSQLQNHIREAHVPS-----CSICGRQFKTAAHLRHH 222
Query: 456 MYQHTGI----KSFKC--NKCFKEFITHYEKRKHMRC----HKIYICEECKKQFDKYNDF 605
+ H K++ C C K F +KH+ + + C+ C +F +
Sbjct: 223 VVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHML 282
Query: 606 QKH 614
Q+H
Sbjct: 283 QRH 285
Score = 33.5 bits (73), Expect = 0.027
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Frame = +3
Query: 111 DKKVHKCTFNGCTTAFSRPFRLTQHL-LTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHL 287
++K + C GC +F+R L +H+ + H AF L RH
Sbjct: 232 ERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTC 291
Query: 288 KIKTDVIYSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQH 467
K K Y EC + + H QK+ + +N + KK IN++ H Y+
Sbjct: 292 K-KAHKPY-INECGIKHDGIEGVAIHDQKEK-ELSSNLVSDVAKKI---INEVTGHGYKE 345
Query: 468 TGIKSFKCNKCFKEFITHYEKRKHMRCH 551
S +C F Y+ +H+ H
Sbjct: 346 AREYSCSFPECNYRFKRLYDMHRHLNSH 373
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 52.0 bits (119), Expect = 7e-08
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = +3
Query: 399 YCCEH--CKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCH---KIYI 563
Y C + C K + + SH+ H + ++C+ C F+ H++ ++H+R H + Y+
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 564 CEECKKQFDKYNDFQKHKK 620
C EC K+F++ + +HK+
Sbjct: 503 C-ECLKRFNRLDALNRHKQ 520
Score = 39.9 bits (89), Expect = 3e-04
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 129 CTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLKI-KTDV 305
C +NGC +R + + H+ TH++ R +R + HD HL+I +
Sbjct: 445 CLYNGCNKRIARKYNVESHIQTHLSDRPYR-----CDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 306 IYSCPECMQVFANRQNLKRHMQK 374
Y C EC++ F L RH Q+
Sbjct: 500 PYVC-ECLKRFNRLDALNRHKQR 521
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 399 YCCEHCKKYFRKINQLRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMRCH 551
Y C C + F + + L+ H Y HTG + F C+ C K F R+H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 32.3 bits (70), Expect = 0.063
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 267 HDNTVHLKIKTDVIYSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEH--CKKYFRKIN 440
H + +V Y C EC+Q F+ +LK H G + C++ C K F +
Sbjct: 454 HTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSH--TGERPFVCDYAGCGKAFNVRS 511
Query: 441 QLRSHMYQH 467
+R H H
Sbjct: 512 NMRRHQRIH 520
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 390 INNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMRCH 551
+ +Y C CK+ F + H+ HTG K F+C+ C K F E +H+R H
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 33.9 bits (74), Expect = 0.021
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 309 YSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEH--CKKYFRKINQLRSHMYQH 467
Y CP C +VF +++ RH+ + H G + C + CKK F + ++L H+ H
Sbjct: 4 YECPFCKRVFHRQEHQVRHI-RSH-TGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 114 KKVHKCTFNGCTTAFSRPFRLTQHLLTHV 200
+K +C++ C F+R L +H+ TH+
Sbjct: 29 EKPFECSYPSCKKRFTRRDELIRHVRTHL 57
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 123 HKCTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLK 290
+KC F GCT +F+R +H +H N +AF L RH N H+K
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
Score = 31.9 bits (69), Expect = 0.083
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +3
Query: 357 KRHMQKKHIQGINNYCCEH--CKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEK 530
K + + +G Y C+ C K F + R H HT K+F C C F
Sbjct: 3 KAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVL 62
Query: 531 RKHM 542
+H+
Sbjct: 63 NRHV 66
Score = 28.7 bits (61), Expect = 0.77
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 309 YSCPECMQVFANRQNLKRHMQKKHIQ 386
+ CP C F L RH+ +KH++
Sbjct: 47 FICPHCSSSFTRSDVLNRHVNQKHVK 72
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 38.7 bits (86), Expect = 7e-04
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 345 RQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQ-HTGIKSFKCNKCFKEFITH 521
RQ R G ++ C C K F++ LR H+ HT K F C C K F
Sbjct: 405 RQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRR 463
Query: 522 YEKRKHMRCH 551
R+H R H
Sbjct: 464 DNLRQHERLH 473
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 309 YSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQH 467
+ CPEC + F ++L+RH++ H C C K F + + LR H H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI--CGKRFSRRDNLRQHERLH 473
Score = 33.9 bits (74), Expect = 0.021
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +3
Query: 429 RKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMR----CHKIYICEECKKQFDKY 596
R+ + ++ + + G KSF C +C K+F R+H+R K ++C C K+F +
Sbjct: 405 RQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRR 463
Query: 597 NDFQKHKK 620
++ ++H++
Sbjct: 464 DNLRQHER 471
Score = 25.4 bits (53), Expect = 7.2
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +3
Query: 552 KIYICEECKKQFDKYNDFQKHKKDM 626
K ++C EC K+F + ++H + +
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSL 445
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 114 KKVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAFR 218
+K H CTF GC FSR LT+H H N + R
Sbjct: 51 EKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Score = 34.3 bits (75), Expect = 0.016
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 399 YCCEHCKKYFRKINQLRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMRCH 551
Y C C K F ++ H+ HTG K C C K F E +H R H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 30.7 bits (66), Expect = 0.19
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 309 YSCPECMQVFANRQNLKRHMQKKHIQGINNYCC-EHCKKYFRKINQLRSHMYQHTGIKS 482
Y CP C + F ++ RH+ + H + C C K F + ++L H HT S
Sbjct: 26 YKCPLCTKAFYRLEHQTRHI-RTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +3
Query: 477 KSFKCNKCFKEFITHYEKRKHMRCH---KIYIC--EECKKQFDKYNDFQKHKK 620
+ +KC C K F + +H+R H K ++C C K+F + ++ +H +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.5 bits (83), Expect = 0.002
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 384 QGINNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCNK 497
Q + Y CE C + F ++ L+ H+ HT K F C++
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSE 102
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 114 KKVHKCTFNGCTTAFSRPFRLTQHLLTHVNVRAF 215
+KV + CT AF+R L +H+ +H N + F
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPF 98
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 309 YSCPECMQVFANRQNLKRHMQ 371
Y C C + FA ++LKRH++
Sbjct: 70 YVCETCTRAFARLEHLKRHIR 90
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
Frame = +3
Query: 474 IKSFKCNKCFKEFITHYEKRKHMRCH---KIYICEE-------CKKQFDKYNDFQKHKK 620
+K + C C + F ++H+R H K + C E C +QF + + +H++
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 255 HLIRHDNTVHLKIKTDVIYSCPECMQVFANRQNLKRHMQKKHIQGIN 395
HL RH+ T H +K +SC C + FA L RH+Q+ H+Q N
Sbjct: 42 HLRRHERT-HENVKA---FSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Score = 35.5 bits (78), Expect = 0.007
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 129 CTFNGCTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTVHLK 290
CT+ C +F+R L +H TH NV+AF L RH +HL+
Sbjct: 28 CTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
Score = 34.7 bits (76), Expect = 0.012
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +3
Query: 318 PECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQ 464
P+C + F +++L+RH ++ H + + + C C + F + + L H+ Q
Sbjct: 31 PDCPKSFTRKEHLRRH-ERTH-ENVKAFSCSFCNRAFARSDVLNRHVQQ 77
Score = 33.9 bits (74), Expect = 0.021
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 354 LKRHMQKKHIQGINNYCC-EHCKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEK 530
LK+ + + YC C K F + LR H H +K+F C+ C + F
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 531 RKHMR 545
+H++
Sbjct: 72 NRHVQ 76
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 LIRHDNTVHLKIKTDVIYSCPEC--MQVFANRQNLKRHMQKKH 380
LIRH +T+H KT ++ C C + F+ L RH++ KH
Sbjct: 595 LIRHQDTIH--AKTRPVFRCEICGDQRHFSRHDALVRHLRVKH 635
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 144 CTTAFSRPFRLTQHLLTHVNVRAFRXXXXXXXXXXXXHLIRHDNTV-HLKIK 296
C T FSR + L +H T ++ + R H RHD V HL++K
Sbjct: 585 CNTVFSRTYDLIRHQDT-IHAKT-RPVFRCEICGDQRHFSRHDALVRHLRVK 634
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/67 (19%), Positives = 35/67 (52%)
Frame = +3
Query: 393 NNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCHKIYICEE 572
+N ++CK+ F++ + S+ + K K F+ ++ K++++ + ++CE
Sbjct: 3243 DNILPDYCKQLFKEDFIVNSNGLKSYIFKLRKWRSYFERLLSKVPKKQYLEQYSSFLCEF 3302
Query: 573 CKKQFDK 593
++FD+
Sbjct: 3303 HHQKFDE 3309
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 28.3 bits (60), Expect = 1.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 483 FKCNKCFKEFITHYEKRKHMRCH 551
F C++C K F H +H CH
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACH 53
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 306 IYSCPECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMYQHTGIKS 482
++ C +C + F +NL RH K C +C+ ++ + L+ H+ + KS
Sbjct: 30 VFPCDQCAKRFTRHENLTRH--KACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
Score = 26.6 bits (56), Expect = 3.1
Identities = 6/22 (27%), Positives = 16/22 (72%)
Frame = +3
Query: 552 KIYICEECKKQFDKYNDFQKHK 617
+++ C++C K+F ++ + +HK
Sbjct: 29 RVFPCDQCAKRFTRHENLTRHK 50
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 444 LRSHMYQHTGIKSFKCN--KCFKEFITHYEKRKHMR 545
L +H+ HTG K F C+ +C + F KHMR
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 423 YFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCHKIYICEECKKQFDKYND 602
Y + ++ + H+ +T + + N C KE+I YE R I E+ + +K +
Sbjct: 97 YAKGMDDIMKHVATYTATMNERMNACHKEYIKMYEALASERNSLYKINEQNVQSLNKVKE 156
Query: 603 F 605
+
Sbjct: 157 W 157
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 558 YICEECKKQFDKYNDFQKHKK 620
+ CE C+K F K F+ HKK
Sbjct: 243 FYCEVCQKFFGKITVFEAHKK 263
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 441 QLRSHMYQHTGIKSFKCNKC-FKEFITHYEKRKHMRCHKIYICEECKKQFDKYNDFQKHK 617
QLR+ Q T I+ K + T ++ +YICE C K + + Q+HK
Sbjct: 92 QLRTPPPQPTSIRYLYFGTYRIKPWYTSPYPEEYSCAKNLYICESCLKYMNSDHVLQRHK 151
>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -3
Query: 383 YVFLLHVTF*I-LTICKHLHTFWTTVNNICFYLQMYCIVM 267
Y F VTF LT C TFWT V N ++ ++ +V+
Sbjct: 162 YFFNYFVTFPFELTTCAITFTFWTDV-NCAVWISIFLVVV 200
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +3
Query: 321 ECMQVFANRQNLKRHMQKKHIQGINNYCCEHCKKYFRKINQLRSHMY 461
EC+Q FA LK QK H NY E KK + L + Y
Sbjct: 1100 ECLQSFA----LKSSPQKSHWLRKRNYIAEKRKKILENLASLNYYEY 1142
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 375 KHIQGINNYCCEHCKKYFRKINQLRSH 455
K I N C C K FR NQL +H
Sbjct: 262 KEIVNSNPIMCMVCNKNFRSQNQLENH 288
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 630 VSCPFYVFENHCIYQTVS 577
V CP VFE CIYQ S
Sbjct: 656 VICPKKVFEEKCIYQITS 673
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.1
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +3
Query: 294 KTDVIYSCPECMQVFANRQNLKRHMQKKHIQ 386
+ D++Y C C + + + +RH +K +Q
Sbjct: 208 EVDIVYICSFCFCYYGSERQFQRHREKCTLQ 238
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 345 RQNLKRHMQKKHIQGINNYCCEHCK--KYFRKI 437
R +LK + ++ ++ N+ C+HCK YF ++
Sbjct: 641 RYDLKEILYRELMEDAENWQCQHCKAFSYFSQV 673
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 255 HLIRHDNTVHLKIKTDVIYSCPECMQVFANRQNLKRHMQKKHI 383
HL H N + L + + +C +C F+N +++ +H+Q H+
Sbjct: 1052 HLRGHLNNIRLNCE---VSNCKKC---FSNYEDMFKHLQHSHL 1088
>SPBC3B9.05 |||helper of TIM |Schizosaccharomyces pombe|chr
2|||Manual
Length = 116
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = +3
Query: 390 INNYCCEHCKKYFRKINQLRSHMYQHTGIKSFKCNKCFKEFITHYEKRKHMRCHKIYICE 569
I CC N++ H T + C KC K F +++ C
Sbjct: 12 IRTACCRRWIDCIECHNEIADHPLLKTSELTLICKKCRKAFRIQFDQTMD---ESDEYCP 68
Query: 570 ECKKQF--DKYNDFQKHKKDMIPK 635
C F D +K K + PK
Sbjct: 69 NCDNHFVIDAITKVEKPKAPISPK 92
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 474 IKSFKCNKCFKEFITHYEKRKHMRCHKIYICEECKKQF 587
I+ F+CN CF EF + + RC + C+ C + +
Sbjct: 169 IRKFQCNVCFDEF-NGTDCFQLTRCGHV-SCQSCLRDY 204
>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 542 HMFPLFIVCNKFFETFVTFKRFYSSVLVH 456
HMFP F NK+ + Y +VL+H
Sbjct: 213 HMFPFFFPLNKYVYLLLFGSVNYWTVLIH 241
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 25.0 bits (52), Expect = 9.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 531 RKHMRCHKIYICEECKKQ 584
R ++C +++ CE CKK+
Sbjct: 27 RLKLKCDRVWPCENCKKR 44
>SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 170
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = -3
Query: 488 FKRFYSSVLVHVRS*LIYFSEILFA----MFTTVIIYTLYVFL--LHVTF 357
F+ SS+ V RS +YF+ I+FA +F +Y+ + + LH+TF
Sbjct: 9 FRFRLSSLHVSSRSLGVYFAGIMFASAVWVFVDAALYSAFDYARNLHITF 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,628,434
Number of Sequences: 5004
Number of extensions: 56075
Number of successful extensions: 259
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -