Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_D01
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr...    98   3e-21
Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical pr...    29   1.4  
AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical ...    29   1.4  
U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical p...    27   5.8  
U13643-4|AAA21082.2|  258|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U88177-4|AAB42289.2|   80|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AF047657-2|AAK18950.2|  358|Caenorhabditis elegans Serpentine re...    27   7.7  
AC006712-2|AAK39324.1|  754|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
           protein B0464.2 protein.
          Length = 1150

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 50/130 (38%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
 Frame = +1

Query: 118 NEVIKNKKIKMSLEIPLMST--DEVIDLDPEQLPSGDEVLSILQQERSQLNVWINVALAY 291
           +E I + +   ++ IPL  +  DEVI+++  +LP G+EVL IL+ E ++L+ WI VAL Y
Sbjct: 2   DESIDDVQETRTIAIPLKDSHEDEVIEINCSELPDGEEVLQILEAEEAKLSYWIEVALEY 61

Query: 292 YKQKKIDDFLKILEASRTDANIDYRDFERDQMRALDMLAAYYVQXXXXXXXXXXXXXXXX 471
           Y+Q ++D F+ ILE++ + A ++Y   ++DQMRALD+LAAY++                 
Sbjct: 62  YRQDRVDLFMMILESAGSRAGLEYEGVKQDQMRALDILAAYWMTQGYREKAKDKKSDFFS 121

Query: 472 XATLLYTMAD 501
            AT+L+  AD
Sbjct: 122 KATVLFNTAD 131


>Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical
           protein C08B6.2 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -1

Query: 141 FFIFNYFIIQNSNLLTKIYQNVYLSRFLCMYKHIKKFFFFLEFV 10
           FF  ++  IQ   LL +  +N ++    C Y +IK FF+++ F+
Sbjct: 368 FFGHDFGFIQIITLLDQ--ENFFVLHLFCFYHNIKYFFYYIIFM 409


>AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.3 protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 323 RSWKHHVQMPTLTIGISKEIRCGLSTC-WPHTMCKKLTK 436
           RS + H+ +PT     ++  RC  STC W H +   L +
Sbjct: 50  RSMQEHLSVPTYCTDPNESFRCSSSTCYWLHRIVLNLPR 88


>U41109-12|AAB37043.1|  451|Caenorhabditis elegans Hypothetical
           protein F52E1.10 protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +2

Query: 206 NYLPAMRCSVFYNKNAH 256
           ++ PA +C VF+N+NAH
Sbjct: 345 HWSPAHKCEVFWNENAH 361


>U13643-4|AAA21082.2|  258|Caenorhabditis elegans Hypothetical
           protein T07E3.3 protein.
          Length = 258

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = +2

Query: 269 GLMLHSHITNKRKSMTSSRSWKHHVQMP 352
           G++ ++ I N+R+ + +SR WK  +++P
Sbjct: 46  GILHNAQIWNQRRQVHNSRLWKTKIEVP 73


>U88177-4|AAB42289.2|   80|Caenorhabditis elegans Hypothetical
          protein F53E10.3 protein.
          Length = 80

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 54 MYKHIKKFFFFLEFV 10
          M+ HI KFFFF +FV
Sbjct: 1  MFTHILKFFFFFKFV 15


>AF047657-2|AAK18950.2|  358|Caenorhabditis elegans Serpentine
           receptor, class h protein270 protein.
          Length = 358

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +2

Query: 221 MRCSVFYNKNAHNSMFGLMLHSHITNKRKSMTSSRSWKHHVQMPTLTIGI 370
           ++  +F  KN   S F +  +S   ++RK + +  SWK  + +   TI +
Sbjct: 309 LKFDIFTRKNNQVSSFVVSRNSVAIDRRKKIENDSSWKRLISVFNRTIRV 358


>AC006712-2|AAK39324.1|  754|Caenorhabditis elegans Hypothetical
           protein Y119C1B.5 protein.
          Length = 754

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 171 H*RYFQRHLDFFIFNYFIIQNSNLLTKIYQNVYLSRFLCMYKHIKKFFFF 22
           H R F  H    I +YF+I     ++ ++  + LSR + MY H    F F
Sbjct: 101 HRRNFDHHAAI-ILSYFVI----FISLMFLTLPLSRLIRMYSHFLSVFLF 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,365,296
Number of Sequences: 27780
Number of extensions: 229362
Number of successful extensions: 666
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)