Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_C22
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0369 + 7843364-7843631,7844994-7845053,7845659-7845741,784... 88 7e-18
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161... 37 0.012
11_06_0607 + 25437897-25438046,25438180-25438236,25438522-254386... 36 0.028
11_04_0295 - 15988738-15988794,15988890-15988932,15989072-15989217 30 1.9
07_01_0332 - 2345980-2346566,2346715-2348262,2349214-2350279 29 2.5
11_04_0438 - 17737040-17737122,17737373-17737496,17737897-177381... 29 4.3
08_02_0311 - 15635165-15635590,15635777-15638698 29 4.3
11_03_0116 - 10220821-10220937,10221414-10221497,10221613-102216... 28 5.7
02_05_1273 + 35381626-35382486,35382567-35382691,35384851-353854... 28 5.7
01_05_0435 + 22117612-22117756,22118054-22118070,22119154-221192... 28 5.7
03_02_0872 - 11983151-11983432,11983488-11983598,11983744-119840... 28 7.5
05_07_0308 + 29115892-29116083,29116771-29116885,29116978-291170... 27 9.9
>03_02_0369 +
7843364-7843631,7844994-7845053,7845659-7845741,
7845834-7845898,7845965-7845998,7846102-7846172,
7850409-7850532,7851151-7851268,7851803-7851889,
7851972-7852055,7852127-7852209,7852556-7852624
Length = 381
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/105 (36%), Positives = 69/105 (65%)
Frame = +1
Query: 292 IPIQKLDISYSASSGPGGQNVNKVHTKVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEG 471
I + + ++++ S G GGQNVNKV+TKVD+RF + +A W+ I++R+L+ ++ K+G
Sbjct: 87 ITLDHVTLNFARSGGAGGQNVNKVNTKVDMRFNVKEAQWLGERIKERILQTEKNRINKDG 146
Query: 472 YLIIKSDCTRSQQLNLADCMRKLRNMIRDAEVTKREPSPETQERI 606
L+I S TR+Q+ N+ D ++K++ +I A PS E ++++
Sbjct: 147 ELVISSTKTRTQKGNIEDALQKIQAIIDAASYVPPPPSEEQKKKV 191
>07_03_0802 -
21614891-21615195,21615637-21615823,21615939-21616154,
21616669-21616872,21617336-21617569,21617670-21617763,
21618844-21618890,21619293-21619309,21620183-21620459
Length = 526
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 292 IPIQKLDISYSASSGPGGQNVNKVHTKV 375
IP + L+IS++ + G GGQNVNKV T V
Sbjct: 384 IPEEDLEISFTRAGGKGGQNVNKVETAV 411
>11_06_0607 +
25437897-25438046,25438180-25438236,25438522-25438602,
25438720-25438777,25438888-25438991,25439064-25439115,
25439232-25439281,25440279-25440443,25440531-25440603,
25440714-25440846,25441146-25441203,25441411-25441458,
25441593-25441676,25441803-25441868,25442419-25442502
Length = 420
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 247 TPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHTKVDLRFK 390
T A P+ +E I + +++ + S G GGQNVNKV T VDL K
Sbjct: 233 TVAIMPEADE-VDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHK 279
>11_04_0295 - 15988738-15988794,15988890-15988932,15989072-15989217
Length = 81
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 367 TKVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRN 546
TKV+++ K HP+I +R++ + T + ++ + T S +L + M+ L++
Sbjct: 16 TKVEIKIKNVPEHANHPEIMERLVSFFCDAQTYRLHCMLDQNRTLSLKLKILKSMKTLKS 75
Query: 547 M 549
M
Sbjct: 76 M 76
>07_01_0332 - 2345980-2346566,2346715-2348262,2349214-2350279
Length = 1066
Score = 29.5 bits (63), Expect = 2.5
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Frame = +1
Query: 100 KMTLATLRLNFIRGLIK-NPTCTALLQRPLGYKSSIALETLYPNSSLK-LTTPAFKPDGN 273
K+T+ L N RG I N +++LQ + + ++ +P SS K L+ GN
Sbjct: 458 KLTVLDLSSNQFRGPIPANLLTSSMLQELYIHDNMLSGGLSFPGSSSKNLSLQVLDISGN 517
Query: 274 EKFSGFIP--------IQKLDISYSASSGPGGQNVNKVHTKVDLRFKLSDADWIHPDIRQ 429
F+G +P +Q LDIS + SGP ++ K+ L ++ PD
Sbjct: 518 H-FNGSLPDEIASLSSLQALDISTNNFSGPLPASITKLAALTALDISINQFTGSLPDALP 576
Query: 430 RMLELYD 450
L+ ++
Sbjct: 577 DTLQSFN 583
>11_04_0438 -
17737040-17737122,17737373-17737496,17737897-17738182,
17738265-17738397,17738742-17738953,17739455-17739816,
17739907-17739937,17744738-17745111
Length = 534
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 263 GLNAGVVSFKELFG*RVSNAMELLYPRGLWSNAVQVGFLIKPRIKFKRNVAKV 105
GL+A + F EL G + +L++ GLW + +V F+ + + + AK+
Sbjct: 353 GLHAELNHFAELLGKKTVKYEDLVWEAGLWEHNSKVQFIREIYWHYNNDEAKI 405
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 217 LYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISY 321
+YP +S+ L F P FSGF +QKLDI++
Sbjct: 923 IYPFTSIFLLVYCFIP-ALSLFSGFFIVQKLDIAF 956
>11_03_0116 -
10220821-10220937,10221414-10221497,10221613-10221687,
10223267-10223318,10223367-10223413,10226277-10226333,
10226829-10226927,10229462-10229581,10229666-10229788,
10229988-10230104
Length = 296
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 466 EGYLIIKSDCTRSQQLNLADCMRKLRNMIRDAEVTKREPSPETQERIRXR 615
E LI+++ C+ A +RK + I++++VTK PS + R R +
Sbjct: 48 ETALIVQAYCSSGLTKEFAATLRKAHDFIKNSQVTKNCPSYSSFYRERSK 97
>02_05_1273 +
35381626-35382486,35382567-35382691,35384851-35385450,
35385550-35385841,35386199-35386364,35386664-35386707,
35386866-35386979,35387171-35387290,35387541-35387626,
35388340-35388502
Length = 856
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 514 NLADCMRKLRNMIRDAEVT-KREPSPETQERIRXRQLKAARL 636
+L R+L + DA+ REPSP+T +R R RQ+ A RL
Sbjct: 138 SLLQMWRELEHRRSDADQPFDREPSPDTADRERVRQI-ARRL 178
>01_05_0435 +
22117612-22117756,22118054-22118070,22119154-22119224,
22119314-22119377,22119673-22119720,22119805-22119867,
22119945-22120001,22120090-22120248,22120324-22120392,
22120477-22120568,22121129-22121207,22121756-22121918,
22122524-22122648,22122733-22122995,22123085-22123163,
22123254-22123415,22123551-22123655,22123782-22123876,
22123963-22124059,22124154-22124384
Length = 727
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 439 ELYDKKLTKEGYLIIKSDCTR 501
E +DK L KEG+ + DCT+
Sbjct: 311 ESFDKSLEKEGFAVAARDCTK 331
>03_02_0872 -
11983151-11983432,11983488-11983598,11983744-11984007,
11984038-11984163,11984257-11984481,11984757-11985311,
11985390-11985695,11985815-11986369
Length = 807
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 375 DFCMNLVYVLTSWPGAGTV 319
DF M +VL WPG+G +
Sbjct: 662 DFDMRFTFVLAGWPGSGNI 680
>05_07_0308 +
29115892-29116083,29116771-29116885,29116978-29117087,
29118225-29118350,29118450-29118570,29118665-29118749,
29118854-29118967,29119061-29119100,29119517-29119665,
29120223-29120412,29121674-29122228,29123588-29123815,
29123904-29124044,29124134-29124334,29124447-29124728
Length = 882
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 343 GQNVNKVHTKVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLI 480
GQN V D + D +R+R+L + D+ +EG+++
Sbjct: 783 GQNAKFVEVTPDTSLEAPDEAMFRMQLRERLLHVLDRLPPREGHVL 828
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,101,924
Number of Sequences: 37544
Number of extensions: 286671
Number of successful extensions: 719
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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