Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_C22
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.      31   0.042
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     31   0.042
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.8  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   6.4  

>Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.
          Length = 153

 Score = 30.7 bits (66), Expect = 0.042
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 520 ADCMRKLRNMIRDAEVTKREPSPETQERIRXRQLKAAR 633
           +DC ++L +  RDAE  +R  + E Q++I+  Q +A R
Sbjct: 79  SDCQQRLDSAKRDAEADRRAFTAEMQKKIQVNQWEADR 116


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 30.7 bits (66), Expect = 0.042
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 520 ADCMRKLRNMIRDAEVTKREPSPETQERIRXRQLKAAR 633
           +DC ++L +  RDAE  +R  + E Q++I+  Q +A R
Sbjct: 79  SDCQQRLDSAKRDAEADRRAFTAEMQKKIQVNQWEADR 116


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 67  FLCVIFDKFSFKMTLATLRLNFIRGLIKNPTCTALL 174
           +LC IF KF+ K+ + +  + F   L    T T LL
Sbjct: 43  YLCYIFSKFACKIQIQSFSMAFPINLAVPVTVTLLL 78


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
 Frame = +1

Query: 442  LYDKKLTKEGYLIIKSDCTRSQQLN----LADCMRKLRNMIRDAE-VTKREPSPETQERI 606
            L+++ +  +   +  +D  R ++L       +  R+     R AE +    PSP T+ R 
Sbjct: 1032 LFEQGVLADNAQLRNADVLRQERLRRYNETRNAARRAATQQRQAERLPPPPPSPRTERRR 1091

Query: 607  RXRQLKAARLR 639
               +L  ARLR
Sbjct: 1092 EVNRLAVARLR 1102


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 248 LLHLNLMGMKNSQDSYQYRNWI 313
           L H+ +MG     D ++Y  WI
Sbjct: 450 LRHIKIMGYSMRTDRFRYTAWI 471


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,155
Number of Sequences: 2352
Number of extensions: 11910
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)