Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_C22
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81788-1|CAA57387.1| 206|Homo sapiens ICT1 protein protein. 122 1e-27
BT007111-1|AAP35775.1| 206|Homo sapiens immature colon carcinom... 122 1e-27
BC015335-1|AAH15335.1| 206|Homo sapiens immature colon carcinom... 122 1e-27
AK222553-1|BAD96273.1| 206|Homo sapiens immature colon carcinom... 120 3e-27
Y00318-3|CAA68418.1| 244|Homo sapiens protein ( Human mRNA for ... 31 4.8
Y00318-1|CAA68416.1| 565|Homo sapiens protein ( Human mRNA for ... 31 4.8
J02770-1|AAA52455.1| 583|Homo sapiens IF protein. 31 4.8
>X81788-1|CAA57387.1| 206|Homo sapiens ICT1 protein protein.
Length = 206
Score = 122 bits (293), Expect = 1e-27
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 190 YKSSIALETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 369
+KS +L+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVNKV++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNS 97
Query: 370 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 549
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 550 IRDAEVTKREPSPETQE--RIRXRQLKAARLR 639
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>BT007111-1|AAP35775.1| 206|Homo sapiens immature colon carcinoma
transcript 1 protein.
Length = 206
Score = 122 bits (293), Expect = 1e-27
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 190 YKSSIALETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 369
+KS +L+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVNKV++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNS 97
Query: 370 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 549
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 550 IRDAEVTKREPSPETQE--RIRXRQLKAARLR 639
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>BC015335-1|AAH15335.1| 206|Homo sapiens immature colon carcinoma
transcript 1 protein.
Length = 206
Score = 122 bits (293), Expect = 1e-27
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 190 YKSSIALETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 369
+KS +L+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVNKV++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNS 97
Query: 370 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 549
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 550 IRDAEVTKREPSPETQE--RIRXRQLKAARLR 639
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>AK222553-1|BAD96273.1| 206|Homo sapiens immature colon carcinoma
transcript 1 variant protein.
Length = 206
Score = 120 bits (290), Expect = 3e-27
Identities = 63/152 (41%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +1
Query: 190 YKSSIALETLYPNSSLKLTTPAFKPDGNEKFSGFIPIQKLDISYSASSGPGGQNVNKVHT 369
+KS +L+ LYP S T P+G ++ IP+ +L ISY SSGPGGQNVN+V++
Sbjct: 39 FKSIYSLDKLYPESQGSDTAWRV-PNGAKQADSDIPLDRLTISYCRSSGPGGQNVNRVNS 97
Query: 370 KVDLRFKLSDADWIHPDIRQRMLELYDKKLTKEGYLIIKSDCTRSQQLNLADCMRKLRNM 549
K ++RF L+ A+WI +RQ++ + K+ + G LI+ S+ +R Q NLADC++K+R+M
Sbjct: 98 KAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDM 157
Query: 550 IRDAEVTKREPSPETQE--RIRXRQLKAARLR 639
I +A T +EP+ E + RIR + RLR
Sbjct: 158 ITEASQTPKEPTKEDVKLHRIRIENMNRERLR 189
>Y00318-3|CAA68418.1| 244|Homo sapiens protein ( Human mRNA for
complement control protein factor I. ).
Length = 244
Score = 30.7 bits (66), Expect = 4.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 403 DWIHPDIRQRMLELYDKKLTKEGY 474
DWIHPD+++ ++E D+ + E Y
Sbjct: 59 DWIHPDLKRIVIEYVDRIIFHENY 82
>Y00318-1|CAA68416.1| 565|Homo sapiens protein ( Human mRNA for
complement control protein factor I. ).
Length = 565
Score = 30.7 bits (66), Expect = 4.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 403 DWIHPDIRQRMLELYDKKLTKEGY 474
DWIHPD+++ ++E D+ + E Y
Sbjct: 380 DWIHPDLKRIVIEYVDRIIFHENY 403
>J02770-1|AAA52455.1| 583|Homo sapiens IF protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 403 DWIHPDIRQRMLELYDKKLTKEGY 474
DWIHPD+++ ++E D+ + E Y
Sbjct: 398 DWIHPDLKRIVIEYVDRIIFHENY 421
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,221,340
Number of Sequences: 237096
Number of extensions: 1678758
Number of successful extensions: 10679
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10679
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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