Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_C13
         (578 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0204 - 1612505-1612636,1612809-1612926,1613050-1613162,161...    33   0.16 
03_01_0479 + 3671792-3671844,3671950-3675691,3675815-3675895,367...    30   1.5  
06_01_0938 - 7229953-7230882                                           28   4.7  
10_08_0471 + 18153024-18153026,18153310-18153429,18153826-18153957     28   6.2  
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334...    28   6.2  
04_04_1482 - 33903276-33903374,33903475-33903600,33904110-339043...    28   6.2  

>11_01_0204 -
           1612505-1612636,1612809-1612926,1613050-1613162,
           1613640-1613712,1613797-1613936,1614059-1614129,
           1614262-1614430,1614625-1614690,1615081-1615179,
           1615298-1615471,1615745-1615823,1615929-1616035,
           1616395-1616439
          Length = 461

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 326 PGFLYSXPG*VDLFELPSPWLPEVPSVILLASVCGLDRLRPSTLDS 189
           P  L+   G  DL EL   W P++PS+I+  +  G + L PS +D+
Sbjct: 411 PQLLFVHQGQKDLKELH--WHPQIPSMIISTAADGFNMLMPSNIDT 454


>03_01_0479 +
           3671792-3671844,3671950-3675691,3675815-3675895,
           3675973-3676042,3676157-3676224
          Length = 1337

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -2

Query: 562 ILLYFNKLKNIVIYVFTNADDIFERYHIKVC*QDSCLKKSSFCKHNXIHIVLNSQTRYKI 383
           +L    KL + VI  +  A ++ +   I  C QD CL  S  C    +H+++  +    +
Sbjct: 220 VLADAGKLFSQVIQAYAEAGNLGKSISIYDCAQDRCLIPSGSCYQVLLHLLMERRKNDLV 279

Query: 382 LQLKL 368
           L++ L
Sbjct: 280 LRVYL 284


>06_01_0938 - 7229953-7230882
          Length = 309

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 187 SWVLYRGFFFATFTARHGCTLKR*LIYEIDVKCKYH 80
           +W++  GF F T     GC L      +  +KC+ H
Sbjct: 175 TWMVQMGFSFFTSAVAQGCALHAQSRVDYTIKCRTH 210


>10_08_0471 + 18153024-18153026,18153310-18153429,18153826-18153957
          Length = 84

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 160 KKNPCKAPKKESKVDGRRRSSPQTEAKRITE 252
           KK   +APKK++K+  +R    Q E KR+ E
Sbjct: 38  KKPKLEAPKKKAKLAAKRIRKMQEEEKRLQE 68


>09_04_0594 -
           18831011-18831360,18831562-18832111,18832364-18833406,
           18833496-18833760,18835194-18835340,18835431-18835511,
           18835626-18835804,18835935-18836093,18836269-18836398,
           18836935-18837094,18837337-18837419,18837865-18837915,
           18838035-18838151,18838273-18838359
          Length = 1133

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 134 TMSGREGGKKKTPVKHPRRSPR*MDEDDLAH 226
           T SGR  G KKT V H  R+PR    D + H
Sbjct: 540 TASGRAVGSKKTLVYHHGRAPRGERSDWVMH 570


>04_04_1482 -
           33903276-33903374,33903475-33903600,33904110-33904351,
           33904388-33904626,33904798-33904961,33905738-33906520
          Length = 550

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 212 LRPSTLDSFLGALQGFFFCHLHGQTWLY 129
           LRP       G  + F +CHLH Q  +Y
Sbjct: 400 LRPYCASDLAGKEKNFIYCHLHPQIRVY 427


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,166,331
Number of Sequences: 37544
Number of extensions: 208217
Number of successful extensions: 542
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)