Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_C13
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011542-1|AAS15678.1|   64|Drosophila melanogaster LP11709p pro...    42   8e-04
AL031581-3|CAB41345.1|   64|Drosophila melanogaster EG:115C2.12 ...    42   8e-04
AE014298-70|AAF45528.1|   64|Drosophila melanogaster CG13364-PA ...    42   8e-04
AF237761-1|AAF81410.1|  501|Drosophila melanogaster unknown prot...    35   0.092
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    28   7.9  

>BT011542-1|AAS15678.1|   64|Drosophila melanogaster LP11709p
           protein.
          Length = 64

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 24/65 (36%), Positives = 32/65 (49%)
 Frame = +2

Query: 137 MSGREGGKKKTPVKHPRRSPR*MDEDDLAHXXXXXXXXXXXXXXXXXXXXXGPLTQGWNK 316
           MSGREGGKKK P+K P++  + +DEDD+A                      GPL  G  K
Sbjct: 1   MSGREGGKKK-PLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIK 59

Query: 317 EIREK 331
           +  +K
Sbjct: 60  KSGKK 64


>AL031581-3|CAB41345.1|   64|Drosophila melanogaster EG:115C2.12
           protein.
          Length = 64

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 24/65 (36%), Positives = 32/65 (49%)
 Frame = +2

Query: 137 MSGREGGKKKTPVKHPRRSPR*MDEDDLAHXXXXXXXXXXXXXXXXXXXXXGPLTQGWNK 316
           MSGREGGKKK P+K P++  + +DEDD+A                      GPL  G  K
Sbjct: 1   MSGREGGKKK-PLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIK 59

Query: 317 EIREK 331
           +  +K
Sbjct: 60  KSGKK 64


>AE014298-70|AAF45528.1|   64|Drosophila melanogaster CG13364-PA
           protein.
          Length = 64

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 24/65 (36%), Positives = 32/65 (49%)
 Frame = +2

Query: 137 MSGREGGKKKTPVKHPRRSPR*MDEDDLAHXXXXXXXXXXXXXXXXXXXXXGPLTQGWNK 316
           MSGREGGKKK P+K P++  + +DEDD+A                      GPL  G  K
Sbjct: 1   MSGREGGKKK-PLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIK 59

Query: 317 EIREK 331
           +  +K
Sbjct: 60  KSGKK 64


>AF237761-1|AAF81410.1|  501|Drosophila melanogaster unknown
           protein.
          Length = 501

 Score = 34.7 bits (76), Expect = 0.092
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 172 CKAPKKESKVDGRRRSSPQTEAKRITEGTSGSQGEGNS 285
           C AP++  K+  + R+SP+TE K+  + T G QGE  S
Sbjct: 24  CAAPQRFQKIKRKSRASPETERKK-PKSTIGKQGENPS 60


>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p
           protein.
          Length = 1193

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 550 FNKLKNIVIYVFTNADDIFERYHIKVC*QDSCLK 449
           F +LK +  +   N  D+ E YH KV  +DSCL+
Sbjct: 278 FKQLKVMDDWTEVNDYDVEETYHEKVASRDSCLE 311


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,616,758
Number of Sequences: 53049
Number of extensions: 361973
Number of successful extensions: 1204
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)