Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_C10
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 234 2e-61
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 234 2e-61
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 234 2e-61
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 234 2e-61
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 234 2e-61
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 234 2e-61
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 232 7e-61
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 2e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 2e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 83 6e-16
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 2e-61
Identities = 105/158 (66%), Positives = 122/158 (77%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 2e-61
Identities = 105/158 (66%), Positives = 122/158 (77%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 2e-61
Identities = 105/158 (66%), Positives = 122/158 (77%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 2e-61
Identities = 105/158 (66%), Positives = 122/158 (77%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 234 bits (573), Expect = 2e-61
Identities = 105/158 (66%), Positives = 122/158 (77%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 234 bits (573), Expect = 2e-61
Identities = 105/158 (66%), Positives = 122/158 (77%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 202
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 232 bits (568), Expect = 7e-61
Identities = 104/158 (65%), Positives = 121/158 (76%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 359 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 538
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 539 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 195
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (407), Expect = 2e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 218 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 397
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 398 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 577
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 578 LNVPH 592
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 2e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +2
Query: 179 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 358
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 359 A 361
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 67 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 174
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 83.4 bits (197), Expect = 6e-16
Identities = 35/43 (81%), Positives = 41/43 (95%)
Frame = +2
Query: 524 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVH 652
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVH
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVH 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,584,569
Number of Sequences: 237096
Number of extensions: 2008597
Number of successful extensions: 3776
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3767
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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