Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_C08
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 101 5e-22
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 100 2e-21
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 45 6e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 8e-05
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 41 7e-04
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.007
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.11
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.35
02_04_0633 - 24616563-24617279 30 1.9
10_08_0710 + 20070655-20070990,20071074-20071469 29 2.4
01_01_0735 + 5730783-5733320 29 3.2
11_06_0584 - 25220371-25222917 29 4.3
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 4.3
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 7.5
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 101 bits (242), Expect = 5e-22
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Frame = +1
Query: 37 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 216
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 217 VLLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAW 357
V ESNAIA YV + S L G L A + QW +S +E+ + W
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 358 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 474
+FP LG + + E A + L +L L+ HL + T+L
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 721
Score = 95.5 bits (227), Expect = 3e-20
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 13/159 (8%)
Frame = +1
Query: 37 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 216
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 217 VLLTESNAIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAW 357
V ESNAIA YV A+ L G L A + QW +S +E+ W
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKW 121
Query: 358 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 474
++P LGI + + E A + L +L L+ HL + T+L
Sbjct: 122 LYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 160
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 473 LVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVXRWFLTVAHXPQVSAVVGSL 640
LV +TLAD+++ L F ++ S S +V R+F T+ + P V+G +
Sbjct: 160 LVGHSVTLADIVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDV 215
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 473 LVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVXRWFLTVAHXPQVSAVVGSL 640
LV +TLAD+++ L F ++ + S +V R+F T+ + P V+G +
Sbjct: 721 LVGHSVTLADIVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMGDV 776
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 99.5 bits (237), Expect = 2e-21
Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Frame = +1
Query: 19 PTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAF 198
P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P
Sbjct: 22 PVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVL 81
Query: 199 ESADGKVLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAWVFP 366
E+ +G V ESNAIA YVA N SL G L + + QW +S +E+ W++P
Sbjct: 82 ETPEGAVF--ESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYP 139
Query: 367 YLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 474
LG + E A + L +L L+ HL + T+L
Sbjct: 140 RLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYL 175
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 473 LVTERITLADVIVFSTLLHAFQHVLXPSVRSSLINVXRWFLTVAHXPQVSAVVG 634
LV +TLAD+++ L + F +L S S +V R+F T+ + P V+G
Sbjct: 175 LVGHSVTLADIVMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIG 228
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 44.8 bits (101), Expect = 6e-05
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +1
Query: 79 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 255
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 256 AN-----ESLRGGDLATQARVWQW 312
+ LR G+L A V W
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMW 98
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 44.4 bits (100), Expect = 8e-05
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +1
Query: 73 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 249
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 250 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 390
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 391 KQNVERAKSDLLAALKVLDGHLLTRTFL 474
+Q V + L L+ + L +L
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYL 160
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 41.1 bits (92), Expect = 7e-04
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Frame = +1
Query: 25 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 204
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 205 ADGKVLLTESNAIAYYV----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 363
DG + L ES AI+ Y+ ++ LR +L+ A V W S A +F
Sbjct: 60 -DGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIF 115
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +1
Query: 73 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 249
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 250 YVANES--------LRGGDLATQARVWQW 312
Y+ + LR GD + A V W
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAW 102
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +1
Query: 145 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 300
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.35
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 40 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 216
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 217 VLLTESNAIAYYVANE 264
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>02_04_0633 - 24616563-24617279
Length = 238
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 236 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTVNYC 340
MP+ TT+ M+ S + W P+ G HG VN+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHG--VNWC 33
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 2.4
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +1
Query: 145 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 306
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 307 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 447
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>01_01_0735 + 5730783-5733320
Length = 845
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 120 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKSA 221
T F +W D + + +E SC+K C+ C K+A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>11_06_0584 - 25220371-25222917
Length = 848
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 413 FARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 321
+ +ST C C +PR K +AG S+++D
Sbjct: 408 WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 160 FLKKFPAGKVPAFESADGK 216
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -2
Query: 407 RSTFCLLNCMIPR*GKTQAQEAGSSSLSDHDAHCQTRAWV 288
R T C NC+I + T Q + + C+T WV
Sbjct: 470 RKTICRTNCLICKGTSTSEQNSEDENPDSSRTACETPKWV 509
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,815,175
Number of Sequences: 37544
Number of extensions: 446216
Number of successful extensions: 1269
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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