Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_B14
         (529 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110     29   1.7  
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726...    29   3.1  
10_06_0172 + 11473892-11474896                                         28   5.3  
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741...    28   5.3  
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191...    28   5.3  
04_03_0401 - 15438674-15438772,15439084-15439348,15439822-154399...    27   9.3  

>12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110
          Length = 530

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 237 RTDRSGWCVQTLLSWCAAYHRG 172
           R + + W ++ L  WCAA HRG
Sbjct: 186 RVETTRWSLEQLNRWCAALHRG 207


>01_05_0344 +
           21172101-21172233,21172332-21172402,21172492-21172653,
           21172995-21173100,21174242-21174439,21174565-21174631,
           21174868-21175051,21175145-21175324,21175408-21175587,
           21176472-21176627,21177487-21178067,21178535-21178640,
           21179152-21179331,21179620-21179892
          Length = 858

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +2

Query: 254 RHETHER*AQQEDFKHQTLDGLLINRQLWLAE-GLLSCQTKGGRYCGYPRSVRVDARLXD 430
           R ET  + AQ   F  +    ++I +Q       L+ C   G RY GY    R +A    
Sbjct: 203 RKETMGKCAQLAQFDEELYKAIIIVKQSGNDTFSLIKCNFSGMRYAGYSTCFRKEAGSHG 262

Query: 431 RWNIQGVFCSHK 466
           R +  G+F  H+
Sbjct: 263 R-DTAGIFRVHQ 273


>10_06_0172 + 11473892-11474896
          Length = 334

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 377 GRYCGYPRSVRVDARLXDRWNIQG 448
           G Y GYP +VRVDA     +N+ G
Sbjct: 288 GAYPGYPGAVRVDAATGAGYNVVG 311


>08_02_0076 +
           11967606-11967905,11969125-11969223,11969813-11974124,
           11974177-11974211
          Length = 1581

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
 Frame = +2

Query: 236 RAFEKD--RHETHER*AQQEDFKHQTLDGLLINRQLWLAEGLLSCQTKGGRYCG-YPRSV 406
           R+F+ D  R   H    + ++ ++  +  L+I+ + +L   L SC +    YC  +P+  
Sbjct: 475 RSFDVDYWRRILHTGEWKYKNDENDIMPALMISYK-YLPAHLQSCFS----YCAVFPKYH 529

Query: 407 RVDA-RLXDRWNIQGVFCSHKISTSPTHRGCDLXRD 511
           R +  RL D W  Q + CS  I T P   G +   D
Sbjct: 530 RYEKERLIDMWIAQDLLCSADIHTRPEDIGNEYFDD 565


>05_07_0146 +
           28018236-28018580,28018670-28018777,28018984-28019148,
           28019269-28019736,28019823-28019936,28020038-28020715
          Length = 625

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 141 NFDHDKHIFTGHGGKQR--TKKEASEHTNH 224
           +FDH  H    HGG++R  +  EA  H +H
Sbjct: 275 HFDHHNHHHPIHGGRERGSSPAEADHHRHH 304


>04_03_0401 -
           15438674-15438772,15439084-15439348,15439822-15439915,
           15439997-15440099,15440342-15440384,15440420-15440484
          Length = 222

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 255 VTKLMNAEHNKKTSNTKH*MDC*SIDNYG 341
           +  + N++HNK+  +TKH     SI+ +G
Sbjct: 101 IESIYNSQHNKRRKSTKHATPWASIERHG 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,863,384
Number of Sequences: 37544
Number of extensions: 266409
Number of successful extensions: 615
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)