Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_B07
(385 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 31 1.7
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 31 1.7
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 31 1.7
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 31 1.7
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 31 1.7
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 31 1.7
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 31 1.7
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 31 1.7
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 31 1.7
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 31 1.7
DQ098780-1|AAZ13710.1| 108|Homo sapiens immunoglobulin lambda l... 29 6.8
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 166 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 207
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 222 GKIPYIKGLPDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDY 347
G+ P +G +GGP P P+ + PR+D K+ Y
Sbjct: 179 GRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSY 220
>DQ098780-1|AAZ13710.1| 108|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 108
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 142 PPSKCSTTGFTINIRFSGLSQTAMNNSVKFH 234
PPS T G T++I SG NN+V ++
Sbjct: 5 PPSASGTPGLTVSISCSGSDSNVGNNTVNWY 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,256,916
Number of Sequences: 237096
Number of extensions: 1064974
Number of successful extensions: 2045
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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