Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_B07
         (385 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    25   0.30 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   0.93 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   2.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   3.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   3.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   3.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   6.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.5  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 288 NMMNKNFRPRNDFNEVKNDYKYLKKKLE 371
           N ++ N+   N++N   N+Y    KKL+
Sbjct: 86  NSLSNNYNYNNNYNNYNNNYNTNYKKLQ 113


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 248 KTFNVWNFTELFIAVWL 198
           + F VW F +L+ ++WL
Sbjct: 126 EVFKVWIFGDLWCSIWL 142


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 86  HKRDTNSTVKPFEANKSIVHHQNAVQRVSQSTS 184
           H R    ++ P   N+S + H  A    + STS
Sbjct: 727 HFRQHRDSLSPRVENRSAIVHSEASANANSSTS 759


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 294 MNKNFRPRNDFNEVKNDY 347
           +NK++   ND+ E +N+Y
Sbjct: 692 VNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 294 MNKNFRPRNDFNEVKNDY 347
           +NK++   ND+ E +N+Y
Sbjct: 692 VNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 294 MNKNFRPRNDFNEVKNDY 347
           +NK++   ND+ E +N+Y
Sbjct: 692 VNKSWNKWNDWQETQNNY 709


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 324 FNEVKNDYKYLKK 362
           F+E+K+D  YL+K
Sbjct: 525 FDEIKHDMVYLQK 537


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 324 FNEVKNDYKYLKK 362
           F+E+K+D  YL+K
Sbjct: 525 FDEIKHDMVYLQK 537


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 159 YNGFHNQHPIFRPQPDRNE 215
           ++  H QHP  +PQ  +++
Sbjct: 169 HHQMHTQHPHMQPQQGQHQ 187


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 154 ILMVDNRFISFEGLYGRVGISLMREFKFF*SVVIHV*P 41
           ILM+++      G Y  V  +L  E      +V+HV P
Sbjct: 669 ILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPP 706


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,455
Number of Sequences: 438
Number of extensions: 2570
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)