Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP06_F_A16
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 121 5e-28
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 121 5e-28
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 113 9e-26
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 113 9e-26
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 113 9e-26
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 113 9e-26
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 113 9e-26
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 69 2e-12
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 4e-06
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 48 5e-06
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 40 0.002
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.003
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.21
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.21
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 33 0.21
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.36
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.36
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 31 0.84
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.6
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 2.6
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 2.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.6
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 2.6
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 7.8
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 121 bits (291), Expect = 5e-28
Identities = 59/135 (43%), Positives = 81/135 (60%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXX 269
L+V ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 13 LEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELL 68
Query: 270 XXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGXQCGAGVFMAV 449
Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA
Sbjct: 69 GGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQ 128
Query: 450 MEDRHYCGKCHSTMV 494
+RHYCG+CH T+V
Sbjct: 129 HANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 121 bits (291), Expect = 5e-28
Identities = 59/135 (43%), Positives = 81/135 (60%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXX 269
L+V ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 13 LEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELL 68
Query: 270 XXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGXQCGAGVFMAV 449
Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA
Sbjct: 69 GGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQ 128
Query: 450 MEDRHYCGKCHSTMV 494
+RHYCG+CH T+V
Sbjct: 129 HANRHYCGRCHDTLV 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 60 NIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 60 NIQKESTLHLV 70
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 77 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 136 NIQKESTLHLV 146
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 153 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 212 NIQKESTLHLV 222
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 229 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 288 NIQKESTLHLV 298
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 305 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 364 NIQKESTLHLV 374
Score = 112 bits (270), Expect = 2e-25
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 381 MQIFVK-TLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 440 NIQKESTLHLV 450
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 188
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 457 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 60 NIQKESTLHLV 70
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 77 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 136 NIQKESTLHLV 146
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 153 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 212 NIQKESTLHLV 222
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 229 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 288 NIQKESTLHLV 298
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 305 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 364 NIQKESTLHLV 374
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 457 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 515
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 516 NIQKESTLHLV 526
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 533 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 591
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 592 NIQKESTLHLV 602
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 609 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 667
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 668 NIQKESTLHLV 678
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 685 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 743
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 744 NIQKESTLHLV 754
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 761 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 819
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 820 NIQKESTLHLV 830
Score = 112 bits (270), Expect = 2e-25
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 381 MQIFVK-TLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 440 NIQKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 60 NIQKESTLHLV 70
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 77 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 136 NIQKESTLHLV 146
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 153 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 212 NIQKESTLHLV 222
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 229 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 288 NIQKESTLHLV 298
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 305 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 364 NIQKESTLHLV 374
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 381 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 440 NIQKESTLHLV 450
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 457 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 515
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 516 NIQKESTLHLV 526
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 533 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 591
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 592 NIQKESTLHLV 602
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 609 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 667
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 668 NIQKESTLHLV 678
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 685 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 743
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 744 NIQKESTLHLV 754
Score = 112 bits (269), Expect = 2e-25
Identities = 57/71 (80%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 761 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 819
Query: 225 NIQKESTLHLV 257
NIQK+STLHLV
Sbjct: 820 NIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 113 bits (272), Expect = 9e-26
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
MQIF K + L+VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 225 NIQKESTLHLV 257
NIQKESTLHLV
Sbjct: 60 NIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
L +EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 15 LDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +3
Query: 87 PLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
P+ ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 174 PISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 87 PLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
P+ VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 102 PITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 93 QVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
++ DT+ ++K I+ + IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 168 KIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = +3
Query: 45 MQIFGK*PSRARPSPLQVEPSDTIENVKAKIQDKEGIP 158
MQIF K + L+VE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVK-TLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL L
Sbjct: 187 LWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 78 RPSPLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSDYNIQKESTL 248
R L SDT+ +VKAKI +K I PN Q+L+ L+ D TL D + + STL
Sbjct: 112 RTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTL 171
Query: 249 HL 254
L
Sbjct: 172 RL 173
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
L+V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
L+V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +3
Query: 96 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +3
Query: 96 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 191
L+V ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 13 LEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/54 (24%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 LQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 248
++++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 36 VEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 108 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 224
+++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 87 PLQVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 248
P++++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 195 PMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 599 APTLCQDFI*NPSYTAVASVSYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 453
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 599 APTLCQDFI*NPSYTAVASVSYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 453
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 261 STPGGGWIPSGYCSPRGYVHLPAAFQQ 181
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -3
Query: 599 APTLCQDFI*NPSYTAVASVSYRLEG-----TYLFVVVFEDHRAVTLPAVVTVL 453
+P L Q + P Y VAS YR++G +Y+FV+ E+ + + P+V + L
Sbjct: 571 SPDLGQTWFNIPDY--VASTEYRIKGLKPSHSYMFVIRAENEKGIGTPSVSSAL 622
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 7.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 174 LIFAGKQLEDGRTLSDYNIQKESTLHL 254
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,884,334
Number of Sequences: 27780
Number of extensions: 251337
Number of successful extensions: 747
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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