Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP06_F_A14
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1447|AAO41267.1|  212|Drosophila melanogaster CG33057-P...   110   2e-24
AY047502-1|AAK77234.1|  515|Drosophila melanogaster GH01188p pro...    29   4.2  
AE014297-3863|AAF56518.1|  515|Drosophila melanogaster CG5886-PA...    29   4.2  

>AE014296-1447|AAO41267.1|  212|Drosophila melanogaster CG33057-PA,
           isoform A protein.
          Length = 212

 Score =  110 bits (264), Expect = 2e-24
 Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
 Frame = +3

Query: 267 DVQLSKSLSWLLRHGAVKEGLQISAEGYIRVDELLQHKSLCKFSVADVERVVATNEKQRF 446
           + QLSK LSWLLRHGA  EG+ I A+G++ V +L +H     F++  ++ + A + KQR+
Sbjct: 8   NTQLSKKLSWLLRHGAKTEGITIRADGFVSVPDLQKHPRYLCFTLEKLKEIAAADAKQRY 67

Query: 447 KLRFHTETKALEIKANQGHSIQLSNIE---LKLITK-PIYKTVIHGTYLKFWPQIKLQGL 614
            LR++ E    EI+ANQGHS+ +   E   L+ IT        +HGTY + W  I+ QGL
Sbjct: 68  TLRWNPELGVHEIRANQGHSLAVLEGEAGGLENITHVSQVPLAVHGTYYRHWGAIRSQGL 127

Query: 615 SRMKRQHIH 641
           SRM R H+H
Sbjct: 128 SRMNRNHVH 136


>AY047502-1|AAK77234.1|  515|Drosophila melanogaster GH01188p
           protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
 Frame = +3

Query: 351 IRVDELLQHKSLCKF--SVADVERVVATNEKQRFKLR-FHTE-TKALEIKANQ 497
           I+V+E  + +S  KF  S+ DV++ +A N ++  KLR ++ E TK L++ A Q
Sbjct: 113 IKVEEERRKESQTKFQSSLNDVQKSLAKNNEENIKLRDYNIEMTKKLKLLAEQ 165


>AE014297-3863|AAF56518.1|  515|Drosophila melanogaster CG5886-PA
           protein.
          Length = 515

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
 Frame = +3

Query: 351 IRVDELLQHKSLCKF--SVADVERVVATNEKQRFKLR-FHTE-TKALEIKANQ 497
           I+V+E  + +S  KF  S+ DV++ +A N ++  KLR ++ E TK L++ A Q
Sbjct: 113 IKVEEERRKESQTKFQSSLNDVQKSLAKNNEENIKLRDYNIEMTKKLKLLAEQ 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,060,787
Number of Sequences: 53049
Number of extensions: 497466
Number of successful extensions: 1300
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)