Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_P19
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 349 3e-97
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 194 1e-50
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 184 1e-47
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 138 6e-34
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 101 7e-23
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 101 9e-23
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 95 8e-21
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 52 7e-08
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 38 0.001
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 30 0.25
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 28 1.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.8
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 4.1
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 26 5.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 7.2
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 9.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 349 bits (857), Expect = 3e-97
Identities = 159/179 (88%), Positives = 167/179 (93%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSK 270
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMG KDSYV DEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRXNMTX 450
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NR MT
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 451 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 627
I+FETFN PA YVAIQAVLSLYA GRTTGIVLDSGDGV+HTVPIY GYALPHAI+RLDL
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 180
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 194 bits (472), Expect = 1e-50
Identities = 87/175 (49%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSKRGILTL 288
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM KD +V EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 289 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANRXNMTXIMFET 465
+ PIE GI+ NW DME+IW + + + +L PEEHP+LLTE PL N+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 466 FNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLG 630
N PA+ ++Q VL+LYA RTTGIVL+ GDG++H+VPIY G+++P AI + ++G
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIG 186
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 184 bits (447), Expect = 1e-47
Identities = 86/179 (48%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
Frame = +1
Query: 97 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGXKDSYVXDEAQSK 270
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD V DEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRXNMTX 450
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANR M
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 451 IMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 627
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+Y L H + RLD+
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDV 180
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 138 bits (334), Expect = 6e-34
Identities = 80/205 (39%), Positives = 111/205 (54%), Gaps = 32/205 (15%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGXKDSYVXDEAQ----SK 270
+++DNG+G K G+AG+DAP VFP+++ R G G + K SY+ + SK
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 271 RGI------------------LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 396
R +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 397 LLTEAPLNPKANRXNMTXIMFETFNTPAMYVAIQAVLSLYAXGRT--------TGIVLDS 552
LLTE PLNP NR N IMFE+FN +Y+A+QAVL+L A + TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 553 GDGVSHTVPIYXGYALPHAILRLDL 627
GDGV+H +P+ GY + +I + L
Sbjct: 187 GDGVTHIIPVAEGYVIGSSIKTMPL 211
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 101 bits (243), Expect = 7e-23
Identities = 58/169 (34%), Positives = 87/169 (51%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSKR 273
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYIY---KSNP 61
Query: 274 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRXNMTXI 453
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 454 MFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYXGYAL 600
MFE+ PA Y+A Q + +A G+ T ++D G S IY G+ L
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 101 bits (242), Expect = 9e-23
Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSKRGILTL 288
LV+DNGS +AG+ G+ P+ VF ++V R R + + + V ++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 289 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRXNMTXIMFET 465
+ P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT ++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 466 FNTPAMYVAIQAVLSLYAXGR--TTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLGRSR 639
+N P++ I + S Y + ++GIVL+ G+ SH +P+ G + R+ G S+
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQ 201
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 95.1 bits (226), Expect = 8e-21
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSKR 273
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 274 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRXNMT 447
I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R +
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 448 XIMFETFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 627
FE + PA Y+ QAV +A ++T +++D G + P+ G + I + L
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSL 181
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 52.0 bits (119), Expect = 7e-08
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +1
Query: 295 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANRXNMTXIMFE 462
PI+ G V +W+ ++ W H Y+ L P + +PV L +R T FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 463 TFNTPAMYVAIQAVLSLYAXGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLG 630
P +A + ++ LYA G G+V+D G + PI G + A +L LG
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLG 227
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 37.9 bits (84), Expect = 0.001
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 16/190 (8%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSKRGILTL 288
+V+DNG+ KAGFAG P+ + R + G + +G + + D L
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSK-DGNRLFLGNELANCNDFT-----TLQF 59
Query: 289 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRXNMTXIMFE 462
+ E G + +W +W N + P ++ +LLT+ + N ++FE
Sbjct: 60 RRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFE 119
Query: 463 TFNTPAMYVAIQAVLSLYAXGRTT--------------GIVLDSGDGVSHTVPIYXGYAL 600
F A A L + G T +V+DSG +H +P+
Sbjct: 120 EFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQ 179
Query: 601 PHAILRLDLG 630
A+ R+D+G
Sbjct: 180 EQAVKRVDVG 189
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 30.3 bits (65), Expect = 0.25
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +1
Query: 355 FYNELRVAPEEHPVLLTE--APLNPKANRXNMTXIMFETFNTPAM---YVAIQ 498
+Y L E+HP+LLT+ A L P+ + + I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 154 GDDAPRAVFPSIVGRPRHQGVMVGMGXKDSYVXDEAQSKRGILTLKYP 297
G+ PRA F ++ P H G+++ M KD +E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 452 SCSKHSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVXPTPYPSTRDTHSLTPS 613
S S ST PP S S + + + SC T ++ PT +T T ++ P+
Sbjct: 363 STSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 248 TYESXCPM-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 90
T S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/81 (30%), Positives = 31/81 (38%)
Frame = +2
Query: 353 PSTMSSVSPPRNIPSFXXXXXXXXXXXXXXXXXSCSKHSTRPPCTSPSKPCSRCTRXVVP 532
P++ SS S P IP SC+ ++ PP T S S VP
Sbjct: 140 PTSTSSTSIP--IPPTSTSSTDTNSNPLPTTSTSCTTSTSIPP-TGGSSSLSTPITPTVP 196
Query: 533 PVSCWTPATVXPTPYPSTRDT 595
P S T +T P P ST T
Sbjct: 197 PTS--TSSTSIPIPPTSTSST 215
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 452 SCSKHSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVXPTPYPSTRDTHSLTPS 613
S S ST PP S S + + SC T ++ PT +T T ++ P+
Sbjct: 309 STSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 452 SCSKHSTRPPCTSPSKPCSRCTRXVVPPVSCWTPATVXPTPYPSTRDT 595
SC+ ++ PP T S S VPP S T +T P P ST T
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTS--TSSTSIPIPPTSTSST 158
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 516 RVRSYHRYRAGLRRRCXPHRTHL 584
R RS HR+ G RR P+RTHL
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHL 162
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 148 NRPCTYRSHCLLPTRQLP 95
NRP YRSH + TR+ P
Sbjct: 323 NRPSNYRSHSSMGTRRSP 340
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 230 PMPTITP*WRGLPTIEGNTARGASSPAKPAL 138
P+PT P LPT NT + P+ PAL
Sbjct: 74 PVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 624 VQTQDGVRECVSLVDGYGVGXTVAGVQHDTGGTTXRVQREHGLDGDVHGGRVECFE-HDX 448
++++D VS DGY + TG T ++ D D+ GG ++ E H
Sbjct: 611 LESEDKYCIVVSNTDGYEYYSIPTSILDKTGKTVRSLESVQNYDADI-GGTIDLTERHST 669
Query: 447 GHVLSVGLGVEGSLSEKDG 391
+V G S+ G
Sbjct: 670 ASPSTVNSGFSTPRSQATG 688
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,765,809
Number of Sequences: 5004
Number of extensions: 57350
Number of successful extensions: 181
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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