Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P17
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     56   1e-09
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   3.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.8  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   7.8  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   7.8  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   7.8  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   7.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.8  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 55.6 bits (128), Expect = 1e-09
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = +2

Query: 143 KFNDKRGNPLPTQQRLIFAGKQLEDGRTLSDYN 241
           K  DK G P P QQRLIFAGKQLEDGRTLSDYN
Sbjct: 29  KIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYN 60



 Score = 55.6 bits (128), Expect = 1e-09
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = +2

Query: 143 KFNDKRGNPLPTQQRLIFAGKQLEDGRTLSDYN 241
           K  DK G P P QQRLIFAGKQLEDGRTLSDYN
Sbjct: 105 KIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYN 136



 Score = 55.6 bits (128), Expect = 1e-09
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = +2

Query: 143 KFNDKRGNPLPTQQRLIFAGKQLEDGRTLSDYN 241
           K  DK G P P QQRLIFAGKQLEDGRTLSDYN
Sbjct: 181 KIQDKEGIP-PDQQRLIFAGKQLEDGRTLSDYN 212



 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 243 IQKESTLHLV 272
           IQKESTLHLV
Sbjct: 61  IQKESTLHLV 70



 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 243 IQKESTLHLV 272
           IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146



 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 243 IQKESTLHLV 272
           IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 239 CSPRGYVHLPAAFQQRSTSVELGGDSLV 156
           CS  GY  +P      +T V + G++LV
Sbjct: 813 CSAAGYTDIPNNIPMDTTEVYIDGNNLV 840


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 518 VFEDHRAMTLPAVVTVLHHRHE 453
           +F DHR    PA V  L   HE
Sbjct: 903 IFIDHRGHKAPAAVVGLQFLHE 924


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 591 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 499
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 591 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 499
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLTVSRAVLVRSC 140


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 591 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 499
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 591 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 499
           Y+  +IH SRE  L+    L + R +   SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -2

Query: 563 ASVPYRLEGTYLFVVVFEDHRAMTLPAVVTVLHHRHEHSG 444
           +S+  +L  T + V+ F DH+A+T+   +    +R  ++G
Sbjct: 207 SSLETQLRTTDMHVLSFSDHKALTVRLCLPTPPNRLTNNG 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,242
Number of Sequences: 2352
Number of extensions: 11543
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)