Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P13
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069144-1|AAL39289.1|  417|Drosophila melanogaster GH16063p pro...   193   2e-49
AE014296-753|AAF47833.2|  417|Drosophila melanogaster CG14993-PA...   193   2e-49
DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro...    28   9.6  
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati...    28   9.6  
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,...    28   9.6  
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,...    28   9.6  
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,...    28   9.6  

>AY069144-1|AAL39289.1|  417|Drosophila melanogaster GH16063p
           protein.
          Length = 417

 Score =  193 bits (471), Expect = 2e-49
 Identities = 96/191 (50%), Positives = 123/191 (64%)
 Frame = +2

Query: 83  FQLENLPYGVFTSDKNAQKHIGVAIGEWILXLNIISRLFDGPLLKSKQNVFKEEKLNAFM 262
           F LENLPY VF+++ N    I VAIGE +L L  +S+LF   + KS Q     E LN  M
Sbjct: 14  FPLENLPYAVFSTENNKVHRICVAIGEHVLDLKAVSQLFPFQVQKSLQ----AETLNELM 69

Query: 263 ALTKPHWIEAXETLQKLLDVSSPALQNNAELREKAFVKXTDVQMHVPVEXGDYTDFYSSL 442
            L    W       QKLL   S  L +N +L+  + V  +++++H+P + GDYTDFYSS+
Sbjct: 70  GLDFEAWDVVRSQTQKLLTKGSE-LDHNVDLKAVSIVPQSEIKLHLPAQIGDYTDFYSSI 128

Query: 443 QHATNVXIMFXGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQTLPVEGAAPHFG 622
            HATNV IMF G + AL  NW+HLPVGYHGR+SS+V+SGTPI RP GQT P     P FG
Sbjct: 129 HHATNVGIMFRGPDNALMPNWRHLPVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFG 188

Query: 623 PCRLMDFELEV 655
            C+L+DFELE+
Sbjct: 189 ACKLLDFELEM 199


>AE014296-753|AAF47833.2|  417|Drosophila melanogaster CG14993-PA
           protein.
          Length = 417

 Score =  193 bits (471), Expect = 2e-49
 Identities = 96/191 (50%), Positives = 123/191 (64%)
 Frame = +2

Query: 83  FQLENLPYGVFTSDKNAQKHIGVAIGEWILXLNIISRLFDGPLLKSKQNVFKEEKLNAFM 262
           F LENLPY VF+++ N    I VAIGE +L L  +S+LF   + KS Q     E LN  M
Sbjct: 14  FPLENLPYAVFSTENNKVHRICVAIGEHVLDLKAVSQLFPFQVQKSLQ----AETLNELM 69

Query: 263 ALTKPHWIEAXETLQKLLDVSSPALQNNAELREKAFVKXTDVQMHVPVEXGDYTDFYSSL 442
            L    W       QKLL   S  L +N +L+  + V  +++++H+P + GDYTDFYSS+
Sbjct: 70  GLDFEAWDVVRSQTQKLLTKGSE-LDHNVDLKAVSIVPQSEIKLHLPAQIGDYTDFYSSI 128

Query: 443 QHATNVXIMFXGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQTLPVEGAAPHFG 622
            HATNV IMF G + AL  NW+HLPVGYHGR+SS+V+SGTPI RP GQT P     P FG
Sbjct: 129 HHATNVGIMFRGPDNALMPNWRHLPVGYHGRASSVVVSGTPIRRPLGQTFPDGAEKPVFG 188

Query: 623 PCRLMDFELEV 655
            C+L+DFELE+
Sbjct: 189 ACKLLDFELEM 199


>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein.
          Length = 3790

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 230  VFKEEKLNAFMALTKPHWIEAXETLQKLLDVSSPAL 337
            + K+  L  F +L K H +EA   +++ LDV +PA+
Sbjct: 1827 IHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAM 1862


>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
            transformation/transcription domain-associated protein
            protein.
          Length = 3803

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 230  VFKEEKLNAFMALTKPHWIEAXETLQKLLDVSSPAL 337
            + K+  L  F +L K H +EA   +++ LDV +PA+
Sbjct: 1889 IHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAM 1924


>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
            isoform A protein.
          Length = 3805

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 230  VFKEEKLNAFMALTKPHWIEAXETLQKLLDVSSPAL 337
            + K+  L  F +L K H +EA   +++ LDV +PA+
Sbjct: 1891 IHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAM 1926


>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
            isoform C protein.
          Length = 3628

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 230  VFKEEKLNAFMALTKPHWIEAXETLQKLLDVSSPAL 337
            + K+  L  F +L K H +EA   +++ LDV +PA+
Sbjct: 1735 IHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAM 1770


>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
            isoform B protein.
          Length = 3400

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 230  VFKEEKLNAFMALTKPHWIEAXETLQKLLDVSSPAL 337
            + K+  L  F +L K H +EA   +++ LDV +PA+
Sbjct: 1565 IHKKIVLQVFHSLLKGHALEARSIVKQALDVLTPAM 1600


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,093,455
Number of Sequences: 53049
Number of extensions: 603144
Number of successful extensions: 1348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)