Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P13
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39852-6|AAK39259.1|  418|Caenorhabditis elegans Hypothetical pr...   241   3e-64
U51998-1|AAA96077.1|  122|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U41557-1|AAA83300.1|  418|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical ...    27   8.8  

>U39852-6|AAK39259.1|  418|Caenorhabditis elegans Hypothetical
           protein K10C2.4 protein.
          Length = 418

 Score =  241 bits (590), Expect = 3e-64
 Identities = 111/191 (58%), Positives = 140/191 (73%)
 Frame = +2

Query: 83  FQLENLPYGVFTSDKNAQKHIGVAIGEWILXLNIISRLFDGPLLKSKQNVFKEEKLNAFM 262
           F ++NLPYGVF++  ++ +HIGVAIG+ IL L  I+ LFDGP LK+ Q+VFK+  LNAFM
Sbjct: 13  FPIQNLPYGVFSTKADSSRHIGVAIGDQILNLAEIANLFDGPQLKAHQDVFKQSTLNAFM 72

Query: 263 ALTKPHWIEAXETLQKLLDVSSPALQNNAELREKAFVKXTDVQMHVPVEXGDYTDFYSSL 442
           AL +P W+EA   +Q+LL      L++NA LR +A V  +D  MH+P + GDYTDFYSS+
Sbjct: 73  ALPRPAWLEARARIQQLLSEDCAVLRDNAHLRSRALVAQSDATMHLPAQIGDYTDFYSSI 132

Query: 443 QHATNVXIMFXGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQTLPVEGAAPHFG 622
            HATNV IMF GKE AL  NWK LPVGYHGR+SSIV+SGT + RP GQT   +   P FG
Sbjct: 133 HHATNVGIMFRGKENALMPNWKWLPVGYHGRASSIVVSGTDLKRPVGQTKAPDAEVPSFG 192

Query: 623 PCRLMDFELEV 655
           P +LMDFELE+
Sbjct: 193 PSKLMDFELEM 203


>U51998-1|AAA96077.1|  122|Caenorhabditis elegans Hypothetical
           protein C12D12.4 protein.
          Length = 122

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 80  IFQLENLPYGVFTSDKNAQKHIGVAIGEWILXLNIISRLFDGPLLKSKQNVFKEEKLNAF 259
           I++ +N  Y +F S K   KH      +W L   +I    + P  K+KQ +  + K++ F
Sbjct: 31  IWEEQNPKYPMFISKKKIAKHNTSQCYQWDL---LICFFQEKPNRKTKQKIKSQRKMSGF 87

Query: 260 MAL 268
           + L
Sbjct: 88  IHL 90


>U41557-1|AAA83300.1|  418|Caenorhabditis elegans Hypothetical
           protein C50F7.6 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +2

Query: 230 VFKEEKLNAFMALTKPHWIEAXETLQKLLDVSSPALQNNAELREKAFVKXTDV 388
           V KEEK  +   +  PH+  + +   K+  V +P  +    + E+     TD+
Sbjct: 225 VLKEEKRKSSFRIPVPHYFRSSKAKSKVYQVDAPDEEIEEVIDEEKMAAKTDL 277


>AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical
           protein M70.4 protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +2

Query: 446 HATNVXIMFXGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQTLPVEGA 607
           H T    +    +  LFE    LP+   G    + I G P+HR     L   GA
Sbjct: 204 HETVAKFLEENTQQKLFEGCFDLPIAEIGGEVELKIDGPPVHRADESKLAELGA 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,028
Number of Sequences: 27780
Number of extensions: 317801
Number of successful extensions: 822
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)