Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P10
         (614 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0537 + 25363026-25363217,25363672-25363828,25364660-253646...    62   4e-10
03_03_0158 - 14951504-14951568,14952722-14952797,14952876-149529...    59   2e-09
08_01_0608 - 5339541-5340177,5340555-5340877                           29   2.9  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    27   8.9  

>03_05_0537 +
           25363026-25363217,25363672-25363828,25364660-25364694,
           25364803-25364848,25365277-25365311
          Length = 154

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = +2

Query: 74  QLLWAQRKEDVFLTFSV-ETKDPTIKIXKDSVYFRGEGAPDNXLHEVTIALYDTVLPEKS 250
           ++LWAQR E ++LT S+ + KD  +K     + F      +      T+ L+D+VLPE S
Sbjct: 8   EVLWAQRSEKIYLTISLPDAKDVVLKTEPQGL-FSFLAVANGEPFSFTLELFDSVLPEGS 66

Query: 251 VFVNKGRCVEMILRKEKTDGPFWPTLTKDKKKPHYLKIDFNKW 379
               K     +I   +K    +W  L K ++K  Y+K+D+NKW
Sbjct: 67  KTKTKMGLRNIICSIQKEKKGWWKRLLKSEEKHPYIKVDWNKW 109


>03_03_0158 -
           14951504-14951568,14952722-14952797,14952876-14952943,
           14952997-14953156,14953239-14953425,14953982-14953986
          Length = 186

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
 Frame = +2

Query: 68  HRQLLWAQRKEDVFLTFSV-ETKDPTIKIXKDSVY-FRGEGAPDNXLHEVTIALYDTVLP 241
           H    WAQR + VFLT  + + +D  + +  +  + F  +G  D+  +E+ + L+D V  
Sbjct: 4   HPSTKWAQRSDKVFLTIELPDARDVKLNLKPEGQFIFSAKGPADDTPYELDLELFDAVNV 63

Query: 242 EKSVFVNKGRCVEMILRKEKTDGPFWPTLTKDKKKPH-YLKIDFNKW 379
           E+S      R +  +++K   +  +WP L K + KP  +LK+D++KW
Sbjct: 64  EESKAAVAARSICYLIKK--AESKWWPRLLKKEGKPPVFLKVDWDKW 108


>08_01_0608 - 5339541-5340177,5340555-5340877
          Length = 319

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 363 LISTNGMMRMMXLXKII-HMISSKCSRTLGGAGGPG 467
           L+++NG+ +M+ +  ++  ++ S C +  GG GG G
Sbjct: 122 LVTSNGLAQMIAMAPLLEELVLSYCRKVRGGGGGGG 157


>07_03_0792 - 21541301-21542143,21542426-21542661,21543177-21543373,
            21543459-21544173,21544250-21544892,21545970-21546139,
            21546442-21546943
          Length = 1101

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 65   FHRQLLWAQRKEDVFLTFSVETKDPTIKIXKDSV-YFRGEGAPDNXL 202
            FHR+L    ++    +TF +E +     + KD+V YF G    D  L
Sbjct: 985  FHRKLTHFVQQSQTDITFLLEEEKKMRLLVKDTVDYFHGSAGKDEGL 1031


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,481,026
Number of Sequences: 37544
Number of extensions: 291133
Number of successful extensions: 783
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)