Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P08
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical p...   111   5e-25
L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical pr...   111   5e-25
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine re...    29   2.8  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    29   2.8  
U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical ...    28   6.6  

>L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical
           protein ZK353.1a protein.
          Length = 355

 Score =  111 bits (266), Expect = 5e-25
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 15/136 (11%)
 Frame = +3

Query: 279 PEGEVSSNNIQHIXXREPDDG-DIDPSQDPMAGTIFMERSKASIXNGMTRKR-------- 431
           P  E S+N + HI  RE  +G + DPS +P A   FMERSK+ +     R+         
Sbjct: 40  PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALA 99

Query: 432 --SQHQ-IADNKLKKSSSCSTIYLXDSTVSQPNLKNTVRCVALAIYYHIXNRMS---DRX 593
               H  I    L+KSSSCSTIY+ DSTVSQP+LKNT++C++LAIYYHI NR +   +R 
Sbjct: 100 AGGHHPGILPRSLRKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERL 159

Query: 594 LHIFDEKLHPLSKEXV 641
           + IF+E+LHP+ ++ +
Sbjct: 160 MEIFEERLHPIFRDPI 175


>L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical
           protein ZK353.1b protein.
          Length = 357

 Score =  111 bits (266), Expect = 5e-25
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 15/136 (11%)
 Frame = +3

Query: 279 PEGEVSSNNIQHIXXREPDDG-DIDPSQDPMAGTIFMERSKASIXNGMTRKR-------- 431
           P  E S+N + HI  RE  +G + DPS +P A   FMERSK+ +     R+         
Sbjct: 42  PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALA 101

Query: 432 --SQHQ-IADNKLKKSSSCSTIYLXDSTVSQPNLKNTVRCVALAIYYHIXNRMS---DRX 593
               H  I    L+KSSSCSTIY+ DSTVSQP+LKNT++C++LAIYYHI NR +   +R 
Sbjct: 102 AGGHHPGILPRSLRKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERL 161

Query: 594 LHIFDEKLHPLSKEXV 641
           + IF+E+LHP+ ++ +
Sbjct: 162 MEIFEERLHPIFRDPI 177


>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
           protein C18H2.5 protein.
          Length = 1139

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 507 VSQPNLKNTVRCVALAIYYHIXNRMSDRXLHIFDEKLHP 623
           V + NL N   CV    + +  NR  +  LH+  ++L+P
Sbjct: 808 VREVNLTNVANCVKKGAFINAYNRHGNTALHLATKRLYP 846


>AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine
           receptor, class v protein21 protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 73  KVLWAFYVL-FLCRLIISVYLVVTQCV*NDNEHS 171
           K  W + +  FLC  I+ VY+++  C+    +HS
Sbjct: 18  KFYWNYLIYYFLCIAILPVYILIVACILKSRKHS 51


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +3

Query: 261 KLEDYLPEGEVSSNNIQHIXXREPDDGDIDPSQDPM----AGTIFMERSKASIXNGMTRK 428
           ++E ++  G+      + +   + D  D+DPS++       G + ++RS   +      +
Sbjct: 744 RMERHVSFGDTEIEKYEVVEEGDVDGNDMDPSENTRQWIETGQLCLQRSDIDMLCAKQEE 803

Query: 429 RSQHQIADNKLKKSSSC 479
           ++  +I D+  K S+SC
Sbjct: 804 KANVKIEDDDGKTSTSC 820


>U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical protein
            C01B7.1a protein.
          Length = 935

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 234  PSPIRKDIVKLEDYLPEGEVSSNNIQHIXXREPDDGDIDPSQDP 365
            P P R DI KL+     G++    I+     E +DG  +PS+ P
Sbjct: 879  PLPTRSDIEKLQILASGGDLKIGGIEKYLKEECEDG--EPSEAP 920


>AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical
           protein Y116A8C.13 protein.
          Length = 833

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 338 WRHRSIARSDGWHHF 382
           WRH S   +D WHHF
Sbjct: 794 WRHFSPRHADTWHHF 808


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,759,971
Number of Sequences: 27780
Number of extensions: 272550
Number of successful extensions: 667
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)