Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P08
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.4  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   3.4  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   3.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 236 WTPIAAATILITHDFTTYDDYKE 168
           W P     +L  ++ +TYDD  +
Sbjct: 273 WAPFHVQRLLYVYEDSTYDDINQ 295


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 367 WLAPFSWNVLKLQXXMV*LGSG 432
           WL  +SW + K    M+ +G G
Sbjct: 322 WLEQYSWALFKAMSHMLCIGYG 343


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 367 WLAPFSWNVLKLQXXMV*LGSG 432
           WL  +SW + K    M+ +G G
Sbjct: 290 WLEQYSWALFKAMSHMLCIGYG 311


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 70  DKVLWAFYVLFLCRLIISVYLVVTQ 144
           D +L    +L LC + I  YL VTQ
Sbjct: 118 DILLCTASILSLCAISIDRYLAVTQ 142


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 35  LCESENSTNQRMIRYYGP 88
           LC  EN  +Q ++ Y GP
Sbjct: 563 LCMPENQDSQFLLEYRGP 580


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 35  LCESENSTNQRMIRYYGP 88
           LC  EN  +Q ++ Y GP
Sbjct: 563 LCMPENQDSQFLLEYRGP 580


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 614 FLIKNM*XAVRHSIXYVIVNSKCYTPHSVFQIW 516
           FL +     ++ ++  + V   C+TP+ V  +W
Sbjct: 250 FLTRAKIRTLKMTVIIIAVFFICWTPYYVMSLW 282


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,825
Number of Sequences: 438
Number of extensions: 3443
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)