Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P04
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.     128   5e-32
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.         111   4e-27
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   6e-05
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.0  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score =  128 bits (309), Expect = 5e-32
 Identities = 57/116 (49%), Positives = 80/116 (68%)
 Frame = +1

Query: 160 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLXLSVCSPYFQEM 339
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+AH++ LS CSPYF+E+
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 340 FKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQXELXSFISTAEQLQVKGLT 507
            K  P +HP++ L+DV+ S L  L++F+Y GEVNV Q  L SF+ TAE L+V GLT
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLT 116


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score =  111 bits (268), Expect = 4e-27
 Identities = 51/112 (45%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
 Frame = +1

Query: 172 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQAHKLXLSVCSPYFQEMFKMN 351
           + + L WNN+ +NM++ FH LL     VDVTLA     L+AHK+ LS CS YFQ++   N
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 352 PTQHP-IVFLKDVSHSALRDLLQFMYQGEVNVKQXELXSFISTAEQLQVKGL 504
           P +HP I+  +DV  + L+ +++F+Y+GE++V Q EL S + TA+QL++KGL
Sbjct: 69  PCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGL 120


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 6e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 160 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 276
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = -3

Query: 403 LVQND*HLLKILSDVVLDSF*TFLENRENILIEXIYVLAITCLRQPTLRLRDLHA 239
           L++++  +  I+S+++     T  E R++   E +  +  + LRQ  L +RD  A
Sbjct: 271 LIESEDAIYNIISEIIET---TIQEKRDDAKDESVEAIFQSILRQKNLDIRDKKA 322


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 527 LSSF*LPVKPLT*SCSAVLINDXNSXCLTLTSP 429
           LSS      P+T + S ++ N  NS C    SP
Sbjct: 323 LSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSP 355


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 136 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 267
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 137 FHVESSLSWRRTNNFHY 187
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,161
Number of Sequences: 438
Number of extensions: 3361
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)