Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_P02
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-596|AAF51116.3|  149|Drosophila melanogaster CG9662-PA ...   164   1e-40
AY070777-1|AAL48399.1|   75|Drosophila melanogaster AT03617p pro...    65   6e-11
AE014134-2551|AAS64743.1|  702|Drosophila melanogaster CG33310-P...    29   5.0  

>AE014134-596|AAF51116.3|  149|Drosophila melanogaster CG9662-PA
           protein.
          Length = 149

 Score =  164 bits (398), Expect = 1e-40
 Identities = 79/133 (59%), Positives = 98/133 (73%)
 Frame = +2

Query: 92  MEGLFAIPFTVLEIPNIKIKKPTWLQAPSAMTTFSLVLLSYFLVTGGIIYDVIVEPPSVG 271
           +E L+ +PF +L  PNIK+++ + +  PS M  FS++L SYFLVTGGIIYDVIVEPPS+G
Sbjct: 2   IETLYNLPFHILVPPNIKVRRFS-IPMPSPMAVFSVILFSYFLVTGGIIYDVIVEPPSLG 60

Query: 272 STTDEHGHSRPVAFMPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILL 451
           +T DEHGHSRPVAFMP RVNGQYIMEGLA            II+D+TH P    LNR+LL
Sbjct: 61  ATVDEHGHSRPVAFMPYRVNGQYIMEGLASSFLFTVGGLGFIIMDQTHTPGKTNLNRLLL 120

Query: 452 ISVAFLCILVSFF 490
            ++ F+ ILVSFF
Sbjct: 121 TAMGFIFILVSFF 133



 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 492 TTWIFMRMXLPXYL 533
           TTW+FMRM LP YL
Sbjct: 134 TTWLFMRMKLPSYL 147


>AY070777-1|AAL48399.1|   75|Drosophila melanogaster AT03617p
           protein.
          Length = 75

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 32/59 (54%), Positives = 38/59 (64%)
 Frame = +2

Query: 314 MPNRVNGQYIMEGLAXXXXXXXXXXXXIILDRTHNPTTPKLNRILLISVAFLCILVSFF 490
           MP RVNGQYIMEGLA            II+D+TH P    LNR+LL ++ F+ ILVSFF
Sbjct: 1   MPYRVNGQYIMEGLASSFLFTVGGLGFIIMDQTHTPGKTNLNRLLLTAMGFIFILVSFF 59



 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 492 TTWIFMRMXLPXYL 533
           TTW+FMRM LP YL
Sbjct: 60  TTWLFMRMKLPSYL 73


>AE014134-2551|AAS64743.1|  702|Drosophila melanogaster CG33310-PA
           protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +3

Query: 159 HG-FKLRLP*QPFHWCYSLTFWLLEVLFMM 245
           HG +KLR   +P HW Y+L F +L +LF++
Sbjct: 419 HGKYKLR---RPSHWLYTLVFSVLYILFVI 445


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,937,101
Number of Sequences: 53049
Number of extensions: 560741
Number of successful extensions: 1258
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)