Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_P01
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 105 4e-24
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 57 2e-09
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 54 2e-08
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 44 2e-05
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 35 0.012
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 35 0.012
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 30 0.25
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 30 0.34
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 29 0.59
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 27 1.8
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 27 3.1
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 25 7.2
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 25 7.2
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 25 7.2
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 25 7.2
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 7.2
SPAC17G8.11c |||mannosyltransferase complex subunit |Schizosacch... 25 9.5
SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA methyltransfera... 25 9.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.5
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 25 9.5
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 105 bits (253), Expect = 4e-24
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKE--EADRCYRCNGTGHIARECAQSPDE---PSCYNCNKTGHIARN 353
C+ CN+TGH A +C E + CY C GH+ R+C SP+ CY C + GHIAR+
Sbjct: 38 CYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARD 97
Query: 354 CPEGGRES--------ATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
C G++S + CY C GH +R+C G K CY CGK GH S EC +A
Sbjct: 98 CRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVK-CYSCGKIGHRSFECQQA 153
Score = 99.5 bits (237), Expect = 4e-22
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARN 353
R +C+ C GH AR+C + CY CN TGH A EC + E +CY C GH+ R+
Sbjct: 14 RPGPRCYNCGENGHQARECTK-GSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRD 72
Query: 354 CPEGGRESATQTCYNCNKSGHISRNC-PDGTKT------------CYVCGKPGHISREC 491
CP CY C + GHI+R+C +G ++ CY CG GH +R+C
Sbjct: 73 CPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDC 131
Score = 83.4 bits (197), Expect = 3e-17
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Frame = +3
Query: 129 NARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC-----KEEADRCYRCNGTGHIARECA 293
N + G + + +Q + C+ C GH RDC + CY+C GHIAR+C
Sbjct: 40 NCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCR 99
Query: 294 QSPDEP-----------SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 440
+ + +CY C GH AR+C G + CY+C K GH S C
Sbjct: 100 TNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVK------CYSCGKIGHRSFECQQA 153
Query: 441 T--KTCYVCGKPGHISREC 491
+ + CY C +PGHI+ C
Sbjct: 154 SDGQLCYKCNQPGHIAVNC 172
Score = 74.1 bits (174), Expect = 2e-14
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +3
Query: 309 PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC--PDGTKTCYVCGKPGHIS 482
P CYNC + GH AR C +G CYNCN++GH + C P KTCY CG GH+
Sbjct: 17 PRCYNCGENGHQARECTKGS------ICYNCNQTGHKASECTEPQQEKTCYACGTAGHLV 70
Query: 483 RECDEARN 506
R+C + N
Sbjct: 71 RDCPSSPN 78
Score = 68.5 bits (160), Expect = 8e-13
Identities = 33/78 (42%), Positives = 42/78 (53%)
Frame = +3
Query: 123 RANARRAGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSP 302
R N +++G R G +R C+ C GH ARDC +CY C GH + EC Q+
Sbjct: 99 RTNGQQSG--GRFGG-HRSNMNCYACGSYGHQARDCTMGV-KCYSCGKIGHRSFECQQAS 154
Query: 303 DEPSCYNCNKTGHIARNC 356
D CY CN+ GHIA NC
Sbjct: 155 DGQLCYKCNQPGHIAVNC 172
Score = 34.7 bits (76), Expect = 0.012
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQGGRGVAG 160
CYKC R GH AR+C G+ G
Sbjct: 85 CYKCGRVGHIARDCRTNGQQSGG 107
Score = 34.3 bits (75), Expect = 0.016
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 89 VCYKCNRTGHFARECTQ 139
+CY CN+TGH A ECT+
Sbjct: 37 ICYNCNQTGHKASECTE 53
Score = 32.7 bits (71), Expect = 0.048
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQG 142
CY C GH ARECT+G
Sbjct: 19 CYNCGENGHQARECTKG 35
Score = 31.1 bits (67), Expect = 0.15
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECT 136
++CYKCN+ GH A CT
Sbjct: 157 QLCYKCNQPGHIAVNCT 173
Score = 29.5 bits (63), Expect = 0.44
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQG 142
CY C GH AR+CT G
Sbjct: 118 CYACGSYGHQARDCTMG 134
Score = 27.1 bits (57), Expect = 2.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 83 QRVCYKCNRTGHFAREC 133
++ CY C GH R+C
Sbjct: 57 EKTCYACGTAGHLVRDC 73
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQGGRG 151
CY C + GH + EC Q G
Sbjct: 137 CYSCGKIGHRSFECQQASDG 156
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 57.2 bits (132), Expect = 2e-09
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +3
Query: 174 RQREK-CFKCNRTGHFARDCKEEADR---CYRCNGTGHIARECA-QSPDE-PSCYNCNKT 335
R R+K CF C + GH +DC E D C+RC H C+ + P + C+ C++
Sbjct: 73 RNRDKFCFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAKCFICHEN 132
Query: 336 GHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGTK 446
GH++ C + G C C+ H++++C K
Sbjct: 133 GHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNK 171
Score = 48.4 bits (110), Expect = 9e-07
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 282 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC----PDGTKT 449
R Q + C+ C + GHI ++CPE + C+ C H C P
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCPEA--KDNVSICFRCGSKEHSLNACSKKGPLKFAK 125
Query: 450 CYVCGKPGHISRECDE 497
C++C + GH+S +C++
Sbjct: 126 CFICHENGHLSGQCEQ 141
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKEEAD----RCYRCNGTGHIARECAQSPDE--PS---CYNCNKTGH 341
CF+C H C ++ +C+ C+ GH++ +C Q+P P C C+ H
Sbjct: 102 CFRCGSKEHSLNACSKKGPLKFAKCFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHH 161
Query: 342 IARNCPEGGRESAT 383
+A++C + ++ +
Sbjct: 162 LAKDCDQVNKDDVS 175
Score = 28.7 bits (61), Expect = 0.77
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 444 KTCYVCGKPGHISRECDEARN 506
K C+ C + GHI ++C EA++
Sbjct: 77 KFCFACRQQGHIVQDCPEAKD 97
Score = 25.8 bits (54), Expect = 5.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQGGRGV 154
C+ C+ GH + +C Q +G+
Sbjct: 126 CFICHENGHLSGQCEQNPKGL 146
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 53.6 bits (123), Expect = 2e-08
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKEEADRCYRCNG-TGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 365
C C GH ++DC C C HI+ C P C NC GHIA C E
Sbjct: 89 CHNCKGNGHISKDCPHVL--CTTCGAIDDHISVRC---PWTKKCMNCGLLGHIAARCSE- 142
Query: 366 GRESATQTCYNCNKSGHISRNCP 434
R+ + C C+ H S CP
Sbjct: 143 PRKRGPRVCRTCHTDTHTSSTCP 165
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 315 CYNCNKTGHIARNCPEGGRESATQTCYNCNK-SGHISRNCPDGTKTCYVCGKPGHISREC 491
C+NC GHI+++CP C C HIS CP TK C CG GHI+ C
Sbjct: 89 CHNCKGNGHISKDCPH-------VLCTTCGAIDDHISVRCP-WTKKCMNCGLLGHIAARC 140
Query: 492 DEAR 503
E R
Sbjct: 141 SEPR 144
Score = 49.6 bits (113), Expect = 4e-07
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Frame = +3
Query: 201 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNK-TGHIARNCPEGGRES 377
+R +F D E+ C+ C G GHI+++C C C HI+ CP
Sbjct: 74 SRGRYFGSD-PSESIVCHNCKGNGHISKDC----PHVLCTTCGAIDDHISVRCP------ 122
Query: 378 ATQTCYNCNKSGHISRNCPD----GTKTCYVCGKPGHISREC 491
T+ C NC GHI+ C + G + C C H S C
Sbjct: 123 WTKKCMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTC 164
Score = 30.7 bits (66), Expect = 0.19
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 15/85 (17%)
Frame = +3
Query: 246 RCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGR-------------ESA 380
+C C GHIA C++ C C+ H + CP R
Sbjct: 126 KCMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEV 185
Query: 381 TQTCYNCNKSGHISRNCPDGTKTCY 455
+ CYNC H +C +++ Y
Sbjct: 186 RKFCYNCASDEHFGDDCTLPSRSNY 210
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 80 VQRVCYKCNRTGHFARECTQGGR 148
V++ CY C HF +CT R
Sbjct: 185 VRKFCYNCASDEHFGDDCTLPSR 207
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 44.0 bits (99), Expect = 2e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 315 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 434
C NC GH +CPE + C +C GHI+R+CP
Sbjct: 311 CQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCP 350
Score = 39.5 bits (88), Expect = 4e-04
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 369 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEARN*PQPP 521
R+ Q C NC GH +CP+ C CG GHI+R+C R+ QPP
Sbjct: 304 RDDENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDC-PVRD-QQPP 357
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +3
Query: 177 QREKCFKCNRTGHFARDCKEEADR-----CYRCNGTGHIARECAQSPDEP 311
+ + C C GH DC E + C C GHIAR+C +P
Sbjct: 307 ENQVCQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVRDQQP 356
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 34.7 bits (76), Expect = 0.012
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 414 HISRNCPDGTKTCYVCGKPGHISREC 491
H + CP TCY CGK H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +3
Query: 213 HFARDCKEEADRCYRCNGTGHIAREC 290
H + C CY+C H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 25.8 bits (54), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 92 CYKCNRTGHFAREC 133
CYKC + H REC
Sbjct: 1806 CYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 387 TCYNCNKSGHISRNC 431
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 189 CFKCNRTGHFARDCK 233
C+KC + H R+CK
Sbjct: 1806 CYKCGKADHNLRECK 1820
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 34.7 bits (76), Expect = 0.012
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 414 HISRNCPDGTKTCYVCGKPGHISREC 491
H + CP TCY CGK H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +3
Query: 213 HFARDCKEEADRCYRCNGTGHIAREC 290
H + C CY+C H REC
Sbjct: 1794 HTGKACPVRLSTCYKCGKADHNLREC 1819
Score = 25.8 bits (54), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 92 CYKCNRTGHFAREC 133
CYKC + H REC
Sbjct: 1806 CYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 387 TCYNCNKSGHISRNC 431
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
Score = 25.0 bits (52), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 189 CFKCNRTGHFARDCK 233
C+KC + H R+CK
Sbjct: 1806 CYKCGKADHNLRECK 1820
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 351 NCPEGGRESATQTCYN----CNKSGHISRNCPDGTKTCYVC 461
+CP+G E T C+N C +G+IS P VC
Sbjct: 66 DCPDGSDEPGTSACHNGKFFCKNTGYISSYIPSNRVDDTVC 106
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 29.9 bits (64), Expect = 0.34
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 294 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN-KSGHISRNCPDGTKTCYVCG 464
++ ++P+ N + N + T TC NC ++ + R PDG C CG
Sbjct: 603 KNAEKPTVSNAAEDKKGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQPLCNACG 660
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 29.1 bits (62), Expect = 0.59
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 366 GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKP 470
GR+ T+ C NC + GH+ N K C + G+P
Sbjct: 939 GRKPTTRKCSNCGQVGHMKTN-----KICPLFGRP 968
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 294 QSPDEPSCYNCNKTGHIARN--CPEGGR 371
+ P C NC + GH+ N CP GR
Sbjct: 940 RKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 171 NRQREKCFKCNRTGHFARDCKEEA 242
+RQ KC +C RT + +++C+ +A
Sbjct: 492 SRQFAKCRRCRRTKYCSKECQHQA 515
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKEEADRCY----RCNGTGHIARECAQSPDEPS 314
C++C + GH+ + C AD Y R T I R ++ + P+
Sbjct: 185 CYRCGQKGHWIQACPTNADPNYDGKPRVKRTTGIPRSFLKNVERPA 230
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +3
Query: 282 RECAQSPDEPS-----CYNCNKTGHIARNCP 359
R A PD+P CY C + GH + CP
Sbjct: 169 RIAASVPDKPPPPGYICYRCGQKGHWIQACP 199
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 390 CYNCNKSGHISRNCPDGTKTCYVCGKP 470
CY C + GH + CP Y GKP
Sbjct: 185 CYRCGQKGHWIQACPTNADPNY-DGKP 210
Score = 25.4 bits (53), Expect = 7.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +2
Query: 89 VCYKCNRTGHFAREC 133
+CY+C + GH+ + C
Sbjct: 184 ICYRCGQKGHWIQAC 198
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 181 VRSASSATAQDTLRGIARKRLTVA 252
VRSA S+ Q T R +A+ +TVA
Sbjct: 50 VRSARSSMEQPTFRPVAKNSVTVA 73
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 363 GGRESATQTCYNCNKSG 413
GG+E + ++C +CN SG
Sbjct: 144 GGKEGSVKSCASCNGSG 160
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/70 (22%), Positives = 27/70 (38%)
Frame = -1
Query: 438 RRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQCRY 259
++DS +CCS + + + P S CCS T+ + ++
Sbjct: 228 KKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQE-KKGCCSTEKTSCCSQEKKSCCTSEKPS 286
Query: 258 ICSNGQPLPC 229
CSNG+ C
Sbjct: 287 CCSNGKSTVC 296
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 432 PDGTKTCYVCGKPGHISRECDEARN 506
PDGT YV +PG IS +A N
Sbjct: 64 PDGTTMVYVFPRPGTISPWSSKATN 88
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 399 SYSRSASQTPAPPRDSSVRCGPSCCSCN 316
+YS + T APP SS G SC +CN
Sbjct: 417 TYSPTTLSTNAPPSPSS---GRSCSNCN 441
>SPAC17G8.11c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 601 IVCRAWRPLLIVRAWHH 551
I+ AWR L AWHH
Sbjct: 213 IIWSAWRKLPDAEAWHH 229
>SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/77 (22%), Positives = 28/77 (36%)
Frame = +3
Query: 159 DSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG 338
D +E KC+ T F ++C E+ D N G E + S +
Sbjct: 87 DQNSELSQENLTKCDTTHDFEKNCSEKTDSTSADNIAGFTILEALSATGLRSIRYAKELP 146
Query: 339 HIARNCPEGGRESATQT 389
++ R E+A +T
Sbjct: 147 NVKRILANDLLENAVKT 163
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 388 VCVADSRPPSGQFRAMWP 335
V ++D RPP + RA WP
Sbjct: 302 VSISDYRPPKKRKRAAWP 319
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 168 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNG 266
F CFKC + F K+E Y C+G
Sbjct: 257 FAEDLSMCFKCVKKIQFKTKIKDELYAVYFCSG 289
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,405,191
Number of Sequences: 5004
Number of extensions: 46467
Number of successful extensions: 246
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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