Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_P01
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 90 1e-18
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 75 3e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 75 3e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 75 3e-14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 73 1e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 73 1e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 73 1e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 64 6e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 64 6e-11
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 42 4e-04
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 42 4e-04
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 42 4e-04
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.008
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.008
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.011
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 36 0.019
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.033
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.058
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.077
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.077
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical ... 33 0.13
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 33 0.23
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.23
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.23
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 33 0.23
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 32 0.31
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.41
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.54
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 31 0.54
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 31 0.71
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 30 1.2
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 30 1.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 30 1.2
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.6
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 2.2
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.2
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.2
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 2.9
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 3.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 3.8
U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal glan... 29 3.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical... 29 3.8
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 3.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 3.8
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 5.0
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 5.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 6.7
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 28 6.7
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 8.8
U21321-10|AAG00048.2| 325|Caenorhabditis elegans T box family p... 27 8.8
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 27 8.8
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 90.2 bits (214), Expect = 1e-18
Identities = 54/146 (36%), Positives = 68/146 (46%), Gaps = 40/146 (27%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKE-EAD----------RCYRCNGTGHIARECAQSPDEP-------- 311
C+KC + GH +R+C E+D CY C TGH +R+C +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGG 65
Query: 312 --SCYNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCPDG 440
SCYNC GH +R+CP EGG R Q CYNC +SGHISR C +
Sbjct: 66 GGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTES 125
Query: 441 ----TKTCYVCGKPGHISRECDEARN 506
K CY C + GHISR+C N
Sbjct: 126 GSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 81.4 bits (192), Expect = 5e-16
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 37/132 (28%)
Frame = +3
Query: 240 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 386
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 387 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 488
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 489 CDEARN*PQPPC 524
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
Score = 54.0 bits (124), Expect = 9e-08
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKE----EADRCYRCNGTGHIAREC 290
+KC+ C R+GH +R+C E E RCY+C TGHI+R+C
Sbjct: 107 QKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDC 146
Score = 37.9 bits (84), Expect = 0.006
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQGGRG 151
CY C TGHF+R+C +GG G
Sbjct: 37 CYNCQETGHFSRDCPKGGSG 56
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 129 NARRAGVVSRD---SGFNRQREKCFKCNRTGHFARDCKEEAD 245
N R+G +SR+ SG + + ++C++C TGH +RDC + +
Sbjct: 111 NCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQTN 151
Score = 35.5 bits (78), Expect = 0.033
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQGG 145
CY C R+GH +RECT+ G
Sbjct: 109 CYNCGRSGHISRECTESG 126
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQG 142
R CYKC + GH +R C G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 29.5 bits (63), Expect = 2.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 83 QRVCYKCNRTGHFAREC 133
++ CY+C TGH +R+C
Sbjct: 130 EKRCYQCQETGHISRDC 146
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +2
Query: 92 CYKCNRTGHFAREC----TQGGRGVAGFR 166
CY C GH++R+C ++GG G G R
Sbjct: 69 CYNCGGRGHYSRDCPSARSEGGSGGYGGR 97
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/153 (31%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Frame = +3
Query: 90 FATSATGPGISRAN--ARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC----KEEADR- 248
F SATG G + +G G + CF C + GH + DC KE R
Sbjct: 125 FGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRV 184
Query: 249 CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE----------GGRESATQTC 392
CY C GH +REC + P E N GG E C
Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKC 244
Query: 393 YNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 491
+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 245 FNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 363 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 503
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 17/108 (15%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEAD-RCYRCNGTGHIARECAQSPDEP------------- 311
R+ C+ C + GH +R+C EE R R G G A ++
Sbjct: 180 REPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEER 239
Query: 312 ---SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 240 GPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/93 (29%), Positives = 36/93 (38%)
Frame = +3
Query: 33 H*CLKCSRIFKTDRNEFNAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTG 212
H +C+ K F A G G + N G G R KCF C G
Sbjct: 193 HTSRECTEERKPREGRTGGFGGGA-GFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEG 251
Query: 213 HFARDCKEEADRCYRCNGTGHIARECAQSPDEP 311
H + +C E C+ C GH + EC +P +P
Sbjct: 252 HRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQ 139
RVCY C + GH +RECT+
Sbjct: 183 RVCYNCQQPGHTSRECTE 200
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 450 CYVCGKPGHISRECDEARN*PQP 518
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/153 (31%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Frame = +3
Query: 90 FATSATGPGISRAN--ARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC----KEEADR- 248
F SATG G + +G G + CF C + GH + DC KE R
Sbjct: 125 FGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRV 184
Query: 249 CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE----------GGRESATQTC 392
CY C GH +REC + P E N GG E C
Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKC 244
Query: 393 YNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 491
+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 245 FNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 363 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 503
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 17/108 (15%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEAD-RCYRCNGTGHIARECAQSPDEP------------- 311
R+ C+ C + GH +R+C EE R R G G A ++
Sbjct: 180 REPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEER 239
Query: 312 ---SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 240 GPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/93 (29%), Positives = 36/93 (38%)
Frame = +3
Query: 33 H*CLKCSRIFKTDRNEFNAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTG 212
H +C+ K F A G G + N G G R KCF C G
Sbjct: 193 HTSRECTEERKPREGRTGGFGGGA-GFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEG 251
Query: 213 HFARDCKEEADRCYRCNGTGHIARECAQSPDEP 311
H + +C E C+ C GH + EC +P +P
Sbjct: 252 HRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQ 139
RVCY C + GH +RECT+
Sbjct: 183 RVCYNCQQPGHTSRECTE 200
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 450 CYVCGKPGHISRECDEARN*PQP 518
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/153 (31%), Positives = 60/153 (39%), Gaps = 19/153 (12%)
Frame = +3
Query: 90 FATSATGPGISRAN--ARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC----KEEADR- 248
F SATG G + +G G + CF C + GH + DC KE R
Sbjct: 125 FGGSATGFGSGGGSFGGGNSGFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRV 184
Query: 249 CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARNCPE----------GGRESATQTC 392
CY C GH +REC + P E N GG E C
Sbjct: 185 CYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKC 244
Query: 393 YNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 491
+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 245 FNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 363 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 503
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 17/108 (15%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEAD-RCYRCNGTGHIARECAQSPDEP------------- 311
R+ C+ C + GH +R+C EE R R G G A ++
Sbjct: 180 REPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEER 239
Query: 312 ---SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 240 GPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/93 (29%), Positives = 36/93 (38%)
Frame = +3
Query: 33 H*CLKCSRIFKTDRNEFNAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTG 212
H +C+ K F A G G + N G G R KCF C G
Sbjct: 193 HTSRECTEERKPREGRTGGFGGGA-GFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEG 251
Query: 213 HFARDCKEEADRCYRCNGTGHIARECAQSPDEP 311
H + +C E C+ C GH + EC +P +P
Sbjct: 252 HRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQ 139
RVCY C + GH +RECT+
Sbjct: 183 RVCYNCQQPGHTSRECTE 200
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 450 CYVCGKPGHISRECDEARN*PQP 518
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Frame = +3
Query: 75 NEFNAFATSATGPGISRANARRAGVVSRDSGFNR--QREKCFKCNRTGHFARDC----KE 236
N F + +G G G S G +R + CF C + GH + DC KE
Sbjct: 333 NGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Query: 237 EADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARNCPEG---GRESAT 383
R CY C GH +R+C + P E S + G EG E
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGP 452
Query: 384 QTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 491
C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 207 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEG---- 365
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 366 -GRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 497
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 27/137 (19%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNG---------------TGH---IARECAQS 299
R+ C+ C + GH +RDC EE NG TG +
Sbjct: 279 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSG 338
Query: 300 PDEPSCYNCNKTGHIARNCPEGG----RESATQTCYNCNKSGHISRNCPDGTK-----TC 452
+ S + G + GG R C+NC + GH S +CP+ K C
Sbjct: 339 NNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVC 398
Query: 453 YVCGKPGHISRECDEAR 503
Y C +PGH SR+C E R
Sbjct: 399 YNCQQPGHNSRDCPEER 415
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 369 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 503
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP- 311
R+ C+ C + GH +RDC EE NG G A + +
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGP 452
Query: 312 -SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 207 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 377
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 378 ATQTCYNCNKSG 413
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 99 SATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCN 263
S G G +N +G +D G + CF C + GH + DC KE R CY C
Sbjct: 232 SGFGSG-GNSNGFGSGGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 288
Query: 264 GTGHIARECAQ 296
GH +R+C +
Sbjct: 289 QPGHNSRDCPE 299
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQ 139
RVCY C + GH +R+C +
Sbjct: 282 RVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 408 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 518
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Frame = +3
Query: 75 NEFNAFATSATGPGISRANARRAGVVSRDSGFNR--QREKCFKCNRTGHFARDC----KE 236
N F + +G G G S G +R + CF C + GH + DC KE
Sbjct: 333 NGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Query: 237 EADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARNCPEG---GRESAT 383
R CY C GH +R+C + P E S + G EG E
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGP 452
Query: 384 QTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 491
C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 207 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEG---- 365
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 366 -GRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 497
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 27/137 (19%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNG---------------TGH---IARECAQS 299
R+ C+ C + GH +RDC EE NG TG +
Sbjct: 279 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSG 338
Query: 300 PDEPSCYNCNKTGHIARNCPEGG----RESATQTCYNCNKSGHISRNCPDGTK-----TC 452
+ S + G + GG R C+NC + GH S +CP+ K C
Sbjct: 339 NNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVC 398
Query: 453 YVCGKPGHISRECDEAR 503
Y C +PGH SR+C E R
Sbjct: 399 YNCQQPGHNSRDCPEER 415
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 369 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 503
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP- 311
R+ C+ C + GH +RDC EE NG G A + +
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGP 452
Query: 312 -SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 207 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 377
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 378 ATQTCYNCNKSG 413
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 99 SATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCN 263
S G G +N +G +D G + CF C + GH + DC KE R CY C
Sbjct: 232 SGFGSG-GNSNGFGSGGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 288
Query: 264 GTGHIARECAQ 296
GH +R+C +
Sbjct: 289 QPGHNSRDCPE 299
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQ 139
RVCY C + GH +R+C +
Sbjct: 282 RVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 408 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 518
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 73.3 bits (172), Expect = 1e-13
Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Frame = +3
Query: 75 NEFNAFATSATGPGISRANARRAGVVSRDSGFNR--QREKCFKCNRTGHFARDC----KE 236
N F + +G G G S G +R + CF C + GH + DC KE
Sbjct: 333 NGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKE 392
Query: 237 EADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCNKTGHIARNCPEG---GRESAT 383
R CY C GH +R+C + P E S + G EG E
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGP 452
Query: 384 QTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 491
C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 4e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = +3
Query: 207 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEG---- 365
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 366 -GRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 497
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 27/137 (19%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNG---------------TGH---IARECAQS 299
R+ C+ C + GH +RDC EE NG TG +
Sbjct: 279 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSG 338
Query: 300 PDEPSCYNCNKTGHIARNCPEGG----RESATQTCYNCNKSGHISRNCPDGTK-----TC 452
+ S + G + GG R C+NC + GH S +CP+ K C
Sbjct: 339 NNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVC 398
Query: 453 YVCGKPGHISRECDEAR 503
Y C +PGH SR+C E R
Sbjct: 399 YNCQQPGHNSRDCPEER 415
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 369 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 503
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Frame = +3
Query: 174 RQREKCFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP- 311
R+ C+ C + GH +RDC EE NG G A + +
Sbjct: 393 REPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGP 452
Query: 312 -SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 207 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 377
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 378 ATQTCYNCNKSG 413
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 99 SATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCN 263
S G G +N +G +D G + CF C + GH + DC KE R CY C
Sbjct: 232 SGFGSG-GNSNGFGSGGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 288
Query: 264 GTGHIARECAQ 296
GH +R+C +
Sbjct: 289 QPGHNSRDCPE 299
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQ 139
RVCY C + GH +R+C +
Sbjct: 282 RVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 408 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 518
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 64.5 bits (150), Expect = 6e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +3
Query: 189 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 353
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 354 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 491
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 64.5 bits (150), Expect = 6e-11
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +3
Query: 180 REKCFKCNRTGHFARDCKE---EADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHI 344
R C C + GHFA DC + C C GH A +C Q P P C NC + GH
Sbjct: 592 RFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHF 650
Query: 345 ARNCP-EGGRESATQTCYNCNKSGHISRNCPDGTK 446
A++C E R T+ C C + GH CP K
Sbjct: 651 AKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Frame = +3
Query: 66 TDRNEFNAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD 245
TD + + TG G ++ AG S + N N+ G++ D E
Sbjct: 513 TDAPSKSGLGSFNTGGGAVKSAFGAAGFGSSSNFGNGNTFGEPSDNQRGNW--DGGERPR 570
Query: 246 RCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHI 419
C+ C GHI++EC P P C NC + GH A +C + C NC GH
Sbjct: 571 GCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRNCGIEGHF 627
Query: 420 SRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 524
+ +C D K C CG+ GH +++C + R P PC
Sbjct: 628 AVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Frame = +3
Query: 90 FATSATGPGISRANARRAGVVSRDSGFNRQ----REKCFKCNRTGHFARDCKEEADR--- 248
FA+ P + R R G+ + Q R C C + GHFA+DC+ E R
Sbjct: 604 FASDCDQPRVPRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEP 663
Query: 249 ---CYRCNGTGHIARECAQSPDE 308
C RC GH EC P +
Sbjct: 664 TEPCRRCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 450 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 542
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 64.5 bits (150), Expect = 6e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +3
Query: 189 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 353
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 354 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 491
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 64.5 bits (150), Expect = 6e-11
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +3
Query: 180 REKCFKCNRTGHFARDCKE---EADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHI 344
R C C + GHFA DC + C C GH A +C Q P P C NC + GH
Sbjct: 592 RFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHF 650
Query: 345 ARNCP-EGGRESATQTCYNCNKSGHISRNCPDGTK 446
A++C E R T+ C C + GH CP K
Sbjct: 651 AKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Frame = +3
Query: 66 TDRNEFNAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD 245
TD + + TG G ++ AG S + N N+ G++ D E
Sbjct: 513 TDAPSKSGLGSFNTGGGAVKSAFGAAGFGSSSNFGNGNTFGEPSDNQRGNW--DGGERPR 570
Query: 246 RCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHI 419
C+ C GHI++EC P P C NC + GH A +C + C NC GH
Sbjct: 571 GCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PRVPRGPCRNCGIEGHF 627
Query: 420 SRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 524
+ +C D K C CG+ GH +++C + R P PC
Sbjct: 628 AVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Frame = +3
Query: 90 FATSATGPGISRANARRAGVVSRDSGFNRQ----REKCFKCNRTGHFARDCKEEADR--- 248
FA+ P + R R G+ + Q R C C + GHFA+DC+ E R
Sbjct: 604 FASDCDQPRVPRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEP 663
Query: 249 ---CYRCNGTGHIARECAQSPDE 308
C RC GH EC P +
Sbjct: 664 TEPCRRCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 450 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 542
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 1e-09
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Frame = +3
Query: 135 RRAGVVS-RDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SP 302
R AG V+ D+ +R K + R G +D K C+ C GH +C + S
Sbjct: 194 RAAGKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSS 251
Query: 303 DEPSCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCY 455
+ C+ C H C + G + TC+ C + GHISR+C PDG C
Sbjct: 252 SDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCN 310
Query: 456 VCGKPGHISRECDE 497
VCG H+ R+C E
Sbjct: 311 VCGANTHLRRDCPE 324
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 473
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 474 HISRECDEARN 506
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQGGRGV 154
C+ C + GH +R+C Q GV
Sbjct: 282 CFVCKQVGHISRDCHQNVNGV 302
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 357 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 518
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 246 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 374
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 186 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 296
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 357 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 518
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 246 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 374
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 186 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 296
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 357 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 518
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 246 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 374
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 186 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 296
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 357 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 518
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 246 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 374
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 186 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 296
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 381 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 521
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 293
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 240 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 395
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 381 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 521
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 293
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 446
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 240 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 395
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/128 (26%), Positives = 44/128 (34%), Gaps = 2/128 (1%)
Frame = +3
Query: 147 VVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNC 326
V+ F + K CN H C E D + C G H ++C + C C
Sbjct: 402 VILEQDCFCGKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHHCTKKC----HDKECGEC 456
Query: 327 NKTGHIARNCPEGGR--ESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
+ R CP G +S T C + D TC GK H +C E
Sbjct: 457 ETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCGTPGKNHHCREKCHEG 516
Query: 501 RN*PQPPC 524
P PPC
Sbjct: 517 ---PCPPC 521
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = -1
Query: 441 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNMTARPGSVRTRA 280
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 279 LCAQCRYICSNGQPLPCNPSQSVLCGC 199
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 84 NAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTG-HF---ARDCKEEAD-R 248
N+ SA ISR + + +S ++C C + G H ++ K+ A +
Sbjct: 598 NSQNNSAASQNISREQSWKT--ISVPQKHQNPSDRCSDCQQRGWHMFWCSKKSKDNASQK 655
Query: 249 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 362
C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 656 CDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 470
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 471 GHISREC 491
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 240 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 410
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 411 GHISRNCP 434
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 314
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 654 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 162 SGFNRQREKCFKCNRTGHFARDCKEE 239
S F + CF+CN GH A +C ++
Sbjct: 668 SCFKLKNRACFRCNEMGHIAWNCPKK 693
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 84 NAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTG-HF---ARDCKEEAD-R 248
N+ SA ISR + + +S ++C C + G H ++ K+ A +
Sbjct: 501 NSQNNSAASQNISREQSWKT--ISVPQKHQNPSDRCSDCQQRGWHMFWCSKKSKDNASQK 558
Query: 249 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 362
C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 559 CDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 470
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 471 GHISREC 491
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 240 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 410
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 411 GHISRNCP 434
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 314
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 557 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 162 SGFNRQREKCFKCNRTGHFARDCKEE 239
S F + CF+CN GH A +C ++
Sbjct: 571 SCFKLKNRACFRCNEMGHIAWNCPKK 596
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 84 NAFATSATGPGISRANARRAGVVSRDSGFNRQREKCFKCNRTG-HF---ARDCKEEAD-R 248
N+ SA ISR + + +S ++C C + G H ++ K+ A +
Sbjct: 512 NSQNNSAASQNISREQSWKT--ISVPQKHQNPSDRCSDCQQRGWHMFWCSKKSKDNASQK 569
Query: 249 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 362
C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 570 CDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 294 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 470
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 471 GHISREC 491
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 240 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 410
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 411 GHISRNCP 434
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 314
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 568 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 162 SGFNRQREKCFKCNRTGHFARDCKEE 239
S F + CF+CN GH A +C ++
Sbjct: 582 SCFKLKNRACFRCNEMGHIAWNCPKK 607
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNMTARPGSVRTRALCAQC 265
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 264 RYICSNGQPLPCNPSQSVLCGCT 196
+ +C+N C CGCT
Sbjct: 115 QPVCTNA----CTNGGGCSCGCT 133
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 488
+C+NC++ GH A CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 489 C 491
C
Sbjct: 265 C 265
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 219 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 398
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 399 CNKSGHISRNCPDG 440
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 353
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 354 CPEGGRESATQTCY 395
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQG 142
CYKC GH+A C +G
Sbjct: 252 CYKCGEKGHYANRCHKG 268
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 315 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 431
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 210 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 365
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 390 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 491
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 315 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 431
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 210 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 365
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 390 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 491
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 384 QTCYNCNKSGHISRNCPDG 440
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.033
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 312 SCYNCNKTGHIARNCPEG 365
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.71
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 444 KTCYVCGKPGHISREC 491
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 86 RVCYKCNRTGHFARECTQG 142
R CYKC + GH +R C G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 189 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 278
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 240 ADR-CYRCNGTGHIAREC 290
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDE----PSCYNCNKTGHIAR 350
+KC C+ G DC +++ +C C G R+C Q P C C H A
Sbjct: 843 KKC-DCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQPGFWGFPECRTCQCNDH-AN 899
Query: 351 NCPEGGRESATQTCYNCN--KSGHISRNCPDG 440
C + ++ C C +GH C DG
Sbjct: 900 IC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 249 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 413
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.31
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 309 PSCYNCNKTGHIARNCPEGGRES 377
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 2.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 390 CYNCNKSGHISRNCPDGT 443
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 CYKCNRTGHFARECTQG--GRGVAGFRFQSAT*EVLQVQPHRTLCEGLQ 232
CYKC GH +++C Q GV + + + L+V R L+
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTNRKTEHSEVNTLEVGSGRQTSPSLR 361
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.058
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = -1
Query: 438 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNMTARPGSVRTRA 280
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 279 LCAQCRYICSNGQPLP 232
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.077
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 249 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 428
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.077
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 249 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 428
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = -1
Query: 429 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 268
S +C TC S S+ TP P + V+C PSC +C + P +V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 267 CRYICSNGQPL-PCNPSQSVLC 205
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical
protein F49F1.6 protein.
Length = 259
Score = 33.5 bits (73), Expect = 0.13
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Frame = -1
Query: 420 RCGRTCCSYSRSASQTPAPPRDSSVR-CGPSCCSCNMTARPGSVRTRALCAQCRYIC-SN 247
RCG C+ S +++ T APPR S C S C P V + C + +C S
Sbjct: 122 RCG--VCT-SGASNSTLAPPRPSPTPPCFDSGNECATYTLPCDVNQKIFCPRTCGVCGST 178
Query: 246 GQPLP-------CNPSQSVLCGCT*STSHVAD*NRNPATPRPPCVHSRAKC 115
G P+ P+ +V+ T TP+PPC S C
Sbjct: 179 GVPMAQTTLLTTVKPTTTVVPSTTTKLPATTTKKLPSTTPKPPCKDSSPNC 229
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = -1
Query: 429 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNMTA---RPGSVRTRALC-AQ 268
S +C TC S S+ TP P + V+C PSC +C + P V+ C Q
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 267 CRYICSNGQPL-PCNPSQSVLC 205
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 150 VSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSC 317
+ D N + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 318 YNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 461
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +3
Query: 183 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 350
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 351 NCPEG--GRESATQTCYNCNKSGHISRNCPDGTKTC 452
+C G + C +C S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 150 VSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSC 317
+ D N + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 318 YNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 461
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +3
Query: 183 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 350
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 351 NCPEG--GRESATQTCYNCNKSGHISRNCPDGTKTC 452
+C G + C +C S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 276 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 440
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 186 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 365
+C +C+R GHF C + A AR+ S S Y N +G +N EG
Sbjct: 1356 QCHQCHRIGHFVESCPQRA--------LAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEG 1407
Query: 366 G 368
G
Sbjct: 1408 G 1408
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 47 VLKNFQNRSQ*VQRVCYKCNRTGHFARECTQ 139
+L+ S R C++C+R GHF C Q
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQ 1372
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 150 VSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSC 317
+ D N + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 318 YNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 461
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +3
Query: 183 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 350
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 351 NCPEG--GRESATQTCYNCNKSGHISRNCPDGTKTC 452
+C G + C +C S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 32.7 bits (71), Expect = 0.23
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Frame = +3
Query: 150 VSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSC 317
+ D N + C CN GH+ C C T + A+ C S +E
Sbjct: 1845 ICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQL 1902
Query: 318 YNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 461
CN K G+ C G + + ++C C +G+ SR+C + CY+C
Sbjct: 1903 LQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Frame = +3
Query: 183 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 350
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 351 NCPEG--GRESATQTCYNCNKSGHISRNCPDGTKTC 452
+C G + C +C S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 32.3 bits (70), Expect = 0.31
Identities = 29/108 (26%), Positives = 34/108 (31%), Gaps = 3/108 (2%)
Frame = -1
Query: 411 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSCNMTARP--GSVRTRALCAQCRYICSNGQ 241
RTCC A+ P PP P+ CC R S C R C
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 240 PLPCNPSQSVLCGCT*STSHVAD*NRNPATPRPPCVHSRAKCPVRLHL 97
P CN Q C + N PPC+ + CP R L
Sbjct: 190 PTCCNQGQKACCPPEQPCCPELKLD-NCLASVPPCLRACPSCPCRKRL 236
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 300 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 434
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 249 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 362
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Frame = -1
Query: 429 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNMTARPGSVRTRALCAQC 265
+C +C +C + + + +C P C C C A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 264 RYICSNGQPLPCNPSQSVLCGC 199
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 31.5 bits (68), Expect = 0.54
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +2
Query: 344 RTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 520
RT L R G + ++V LP SR +DV+ + RQA P + RRG +++
Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702
Query: 521 LSPLQSTMYIMMPRTDDKQRTPRATHDNRLQYRCRAASAP 640
LS L S YI R +K+R + +Y A P
Sbjct: 703 LSNLPS--YI--NRRMEKEREREIEYRRDREYSMPPADPP 738
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 111 PGISRANARRA-GVVSRDSGFNRQREKCFKCNRTGHFARDCKEEA 242
P I++A+ R+ ++ D F Q C C GH AR+CK++A
Sbjct: 552 PPIAKADERKTVKLIQVDRRFKGQ---CHYCKNVGHMARNCKKKA 593
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 228 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 404
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 405 KSGHISRNCPDGTKTC 452
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 228 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 404
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 405 KSGHISRNCPDGTKTC 452
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Frame = +3
Query: 99 SATGPGISRANARRAGVVSRDSGFNRQREK--CFKCNRTGHFARDCKEEADRCYRCNGTG 272
S T G+ R GFN +R K ++ + H+ +E+A R C+ G
Sbjct: 374 SITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHY----REDACRTCECDPVG 429
Query: 273 HIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRN 428
++ C A++ +P C G C G R T CN++G ++ +
Sbjct: 430 SVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFD 489
Query: 429 CPDG 440
DG
Sbjct: 490 TCDG 493
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 319
CR C C RTCC + T P CG CC C
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 116
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 319
CR C C RTCC + T P CG CC C
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 119
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Frame = +3
Query: 99 SATGPGISRANARRAGVVSRDSGFNRQREK--CFKCNRTGHFARDCKEEADRCYRCNGTG 272
S T G+ R GFN +R K ++ + H+ +E+A R C+ G
Sbjct: 374 SITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHY----REDACRTCECDPVG 429
Query: 273 HIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRN 428
++ C A++ +P C G C G R T CN++G ++ +
Sbjct: 430 SVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFD 489
Query: 429 CPDG 440
DG
Sbjct: 490 TCDG 493
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Frame = +3
Query: 99 SATGPGISRANARRAGVVSRDSGFNRQREK--CFKCNRTGHFARDCKEEADRCYRCNGTG 272
S T G+ R GFN +R K ++ + H+ +E+A R C+ G
Sbjct: 374 SITPEGVYEGGGRCLECAHNTEGFNCERCKDGYYRPSGLSHY----REDACRTCECDPVG 429
Query: 273 HIAREC------AQSPDEPSCYNCNKT--GHIARNCPEGGRESATQTCYNCNKSGHISRN 428
++ C A++ +P C G C G R T CN++G ++ +
Sbjct: 430 SVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFD 489
Query: 429 CPDG 440
DG
Sbjct: 490 TCDG 493
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 432 PD-GTKTCYVCGKPGHISRECDEAR 503
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 432 PD-GTKTCYVCGKPGHISRECDEAR 503
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 432 PD-GTKTCYVCGKPGHISRECDEAR 503
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 420 RCGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 247
RC TC + + P P PR S+ C PSC P V+ +LC QCR +C+N
Sbjct: 240 RCLPTCIQQIQISVPLPPPAPRCDSM-CMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 390 CYNCNKSGHISRNCPDGTKTCYVC 461
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 390 CYNCNKSGHISRNCP 434
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 5.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 315 CYNCNKTGHIARNCPE 362
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 219 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 362
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -1
Query: 417 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 244
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 107 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 165
Query: 243 QPL-PCNPSQSVLC 205
QP+ C P C
Sbjct: 166 QPIQQCQPQCQQQC 179
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -1
Query: 417 CGRTCCSYSRSASQTPAP-PRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ-CRYICSNG 244
C +TC + S +Q AP P C P+C + P +V+ C Q C C
Sbjct: 108 CQQTCQT-SSCYTQIAAPAPVQCQPSCMPACEQSCVAPAPVTVQCVPQCQQKCTQQCVQA 166
Query: 243 QPL-PCNPSQSVLC 205
QP+ C P C
Sbjct: 167 QPIQQCQPQCQQQC 180
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 390 CYNCNKSGHISRNCPDGTKTCYVC 461
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = +3
Query: 258 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 437
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 438 GTKTCYVCGKPGHISR 485
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 234 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 341
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 319
CR C C RTCC +R + CG CC C
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGC 116
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 319
CRR C C RTCC + T P CG CC C
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 130
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 222 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 398
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 399 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 222 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 398
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 399 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 222 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 398
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 399 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 222 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 398
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 399 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>U88314-8|AAF99888.1| 249|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 2 protein.
Length = 249
Score = 28.7 bits (61), Expect = 3.8
Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 4/133 (3%)
Frame = +3
Query: 96 TSATGPGISRANARRAG--VVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 269
T A+G ++ A R+G V SR S ++ T DC C N
Sbjct: 65 TDASGSTVTVATTIRSGSTVTSRTSSGTGCVDRVNSATGTS----DCANRRALCNDANYF 120
Query: 270 GHIARECAQSPDEPSCYNCNKTGHIARNC--PEGGRESATQTCYNCNKSGHISRNCPDGT 443
+ ++C ++ S ++ T + P+ G CN S +I
Sbjct: 121 DVMTQQCPKTCGRCSSFSSTPTTGTCTDLKNPKTGTSDCASLRSFCNDSNYIDLMRTQCP 180
Query: 444 KTCYVCGKPGHIS 482
+TC CG G S
Sbjct: 181 RTCGFCGSSGSSS 193
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 319
CRR C C RTCC + T P CG CC C
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 441 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSC 319
CRR C C RTCC + T P CG CC C
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGC 131
>AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical
protein Y113G7B.24 protein.
Length = 224
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +2
Query: 341 HRTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVLRVRQARPHL---ARVRRGAELA 511
HR EL R G D LQ++ + +H+ R + + L + ++ E A
Sbjct: 80 HRVELQRIGFITSDYVRCRLQKIESNPHDAIDQHKK--RKEEGKSDLLSESEMKFAEEYA 137
Query: 512 AATLSPLQSTMYIMMPRTDDKQRTPRATHDNRLQY 616
A + Q T+ MP K PR HD+ + Y
Sbjct: 138 LAESNLFQKTVLEFMPAALKKMPVPRGDHDDVMVY 172
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 450 CYVCGKPGHISREC 491
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 3.8
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +3
Query: 222 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 398
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 399 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 500
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = +3
Query: 315 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 467
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 468 PGHISREC 491
H + C
Sbjct: 372 GNHHTVFC 379
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -1
Query: 336 PSCCSCNMTARPGSVRTRAL----CAQCRYICSNGQPLPCNPSQSVLCGCT 196
P+CC+C M + S T+ C C S + C+P S C CT
Sbjct: 49 PTCCACWMRRKKESTTTKVCVQDDCTTCS-CTSASRCSRCSPCCSGCCSCT 98
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 366 GRESATQTCYNCNKSGHISRNCP 434
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 366 GRESATQTCYNCNKSGHISRNCP 434
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 228 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 404
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 405 KSGHISRNCPDGTKTC 452
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 354 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 506
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 285 RALCAQCRYICSNGQPLPCNPSQSVLCGC 199
R++C +C C N P P NP ++ C
Sbjct: 42 RSVCQECPSCCGNDGPQPFNPVFNIHFNC 70
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -1
Query: 414 GRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 268
G C + S P C P CC C+ A+PG A A+
Sbjct: 13 GTLACFPTSQRSYQYGAPTQQFAACTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 426 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 340
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Frame = -1
Query: 420 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRALCA-----QCRYI 256
+C C ++ PP SS C SC P V+ + +CA C+
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMP---QCTPQCVQQQTICAAACQPSCQSS 348
Query: 255 C-SNGQPL-PCNPSQSVLC 205
C SN Q + C PS C
Sbjct: 349 CSSNAQCVQACLPSCESSC 367
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.8
Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
Frame = +3
Query: 198 CNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDE-PSCYNCNKTGHIARN----CPE 362
C + ++ C +A R NG G A C +P + Y+C A CP
Sbjct: 103 CVGSTRISQPCGTQACNYPRTNGPG--APCCIGTPKVINNWYHCGSNSQNAAPTQPCCPV 160
Query: 363 GGRESA-TQTCYN-CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQPP 521
GG + T+ +N N SR+C G C G+ EC P PP
Sbjct: 161 GGVWTEWTRWAHNGANVEWSRSRDCISGGYNCACIGENQETKFECPCTPMKPIPP 215
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 362
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 363 GGRESATQ-TCYNCNK 407
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +3
Query: 183 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 362
E C NR+G + D + D C + + D C C K+ H+ +C
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHL--SCDS 112
Query: 363 GGRESATQ-TCYNCNK 407
S C +C +
Sbjct: 113 SDVSSLNNFVCISCRR 128
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +3
Query: 342 IARNCPEG------GRESATQTCYNCNKSGHISRNCPDGTKTCY 455
++ CP G G S C N +G +S CPDG TCY
Sbjct: 682 LSEACPPGTVVAKDGDGSRLVQCSNPGGNGRVSGGCPDG-YTCY 724
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical protein
ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = -1
Query: 432 DSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNMTARPGSVRTRALCAQCR-Y 259
DS C TC + S P + P+ S +T+ P + R +C Q
Sbjct: 1018 DSLTDCLETCVANGIKFSSLANSPMSAVPPPPPTLMPSPPVTSSPFTFVPRNMCPQGDPL 1077
Query: 258 ICSNGQPLPCNPSQSVLC 205
I +G P+ C+PS++ C
Sbjct: 1078 ITVDGTPIQCDPSKAAKC 1095
>U21321-10|AAG00048.2| 325|Caenorhabditis elegans T box family
protein 35 protein.
Length = 325
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 22 NDRYISVLSAQEFSKP-IAMSSTRLLQVQPDRAF 120
N + S Q SKP + + ST LLQ+ PD +F
Sbjct: 231 NSSFHQSFSNQYLSKPDLDLKSTTLLQIAPDHSF 264
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 432 PDGTKTCYVCGKPGHISRECDEARN 506
P+ + C +CG+ GH +EC A N
Sbjct: 258 PNQPRACDLCGQYGHELKECRGAEN 282
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 411 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNMTARPGSVRTRA 280
RTCC SA+ P+ S + C P CN AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,995
Number of Sequences: 27780
Number of extensions: 331320
Number of successful extensions: 1729
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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