Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_O20
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0180 - 1431758-1431838,1431975-1432061,1432180-1432230,143... 59 3e-09
12_01_0180 - 1335825-1335980,1336584-1336670,1336767-1336859,133... 58 8e-09
02_02_0131 - 7065762-7065813,7065907-7065992,7066080-7066150,706... 55 4e-08
08_02_1631 + 28381248-28381418,28382069-28382144,28382925-283829... 35 0.066
01_01_0899 - 7085140-7085539,7086777-7086868,7088098-7088187 35 0.066
05_03_0088 - 8308587-8308649,8308682-8308738,8310403-8310501,831... 29 2.5
03_02_0529 + 9218734-9218793,9218898-9220050,9220133-9220192,922... 28 5.7
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773... 28 7.5
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 28 7.5
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 27 9.9
11_03_0112 - 10135052-10135168,10135712-10135795,10135879-101359... 27 9.9
09_04_0517 - 18253325-18253870,18254209-18254781,18254888-182551... 27 9.9
02_01_0321 - 2162015-2162134,2162763-2162846,2162931-2163011,216... 27 9.9
02_01_0319 - 2148788-2148892,2149474-2149557,2149643-2149723,215... 27 9.9
01_03_0084 - 12286416-12286514,12286632-12286683,12286771-122868... 27 9.9
>11_01_0180 -
1431758-1431838,1431975-1432061,1432180-1432230,
1432275-1432367,1432496-1432568,1432657-1432751,
1433428-1433515,1433647-1433936
Length = 285
Score = 59.3 bits (137), Expect = 3e-09
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 18/172 (10%)
Frame = +2
Query: 137 HPIKTKAITSCVVGTAGSLASQIVAGESIRLDPIXXXXXXXXXXXXTVP--HYFYETVER 310
HPI TKA+TS V+ G L Q+ + +LD P H +Y + +
Sbjct: 105 HPITTKAVTSAVLTLTGDLICQLAIDKVPKLDLKRTFVFTFLGLVLVGPTLHVWYLYLSK 164
Query: 311 LFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAA--LKQLFAL------ 466
L AS +A +LLL++ IF+P+ + L EGK LKQ+
Sbjct: 165 LVTINGASGAIA-RLLLDQFIFSPIFIGVFMSLLVTLEGKPSLVVPKLKQILCSTADAVA 223
Query: 467 --------YLPVLXANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 598
+L + ANW+ FQ +N F+P +VL N V W + L+
Sbjct: 224 VADMWVREWLSSVIANWQLWIPFQFLNFYFVPQKFQVLAANFVALAWNVILS 275
>12_01_0180 -
1335825-1335980,1336584-1336670,1336767-1336859,
1336985-1337057,1337153-1337247,1337917-1338004,
1338135-1338424
Length = 293
Score = 57.6 bits (133), Expect = 8e-09
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 137 HPIKTKAITSCVVGTAGSLASQIVAGESIRLDPIXXXXXXXXXXXXTVP--HYFYETVER 310
HPI TKA+TS V+ G L Q+ + +LD P H +Y + +
Sbjct: 105 HPITTKAVTSAVLTLTGDLICQLAIDKVPKLDLKRTFVFTFLGLVLVGPTLHVWYLYLSK 164
Query: 311 LFPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQLFALYLPVLXAN 490
L AS +A +LLL++ IF+P+ + L EGK + +L +L + AN
Sbjct: 165 LVMINGASGAIA-RLLLDQFIFSPIFIGVFMSLLVTLEGKP-SLVVPKLKQEWLSSVIAN 222
Query: 491 WKWLTLFQVINLAFIPPMLRVLF 559
W+ FQ +N F+P ++ F
Sbjct: 223 WQLWIPFQFLNFYFVPQKFQLDF 245
>02_02_0131 -
7065762-7065813,7065907-7065992,7066080-7066150,
7066563-7066638,7066977-7067078,7068025-7068123,
7068208-7068339
Length = 205
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 137 HPIKTKAITS-CVVGTAGSLASQIVAGESIRLDPIXXXXXXXXXXXXTVPHYFYETVERL 313
HP++TK IT+ C+ G + S+A ++ + I + H+ ++ ++ +
Sbjct: 39 HPLRTKMITAGCLAGVSDSVAQKLSGYQRIEKRRLLLKMLFGFAYGGPFGHFLHKVLDYI 98
Query: 314 FPEESASFPLAKKLLLERLIFAPLMQAFSLYSLARF-EGKTHRAALKQLFALYLPVLXAN 490
F + + +AKK+LLE++ +P L+ E + + ++ Y V +
Sbjct: 99 FKGKKDTKTIAKKVLLEQITSSPWNNLLFLFYYGYVVERRPFKEVKTRVKKQYPSVQLSA 158
Query: 491 WKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFL 595
W + + IN ++P RV+F + V W +FL
Sbjct: 159 WMFWPIVGWINHMYMPLQFRVIFHSFVACCWGIFL 193
>08_02_1631 +
28381248-28381418,28382069-28382144,28382925-28382995,
28383375-28383460,28384359-28384423,28384727-28385067
Length = 269
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 353 LLLERLIFAPLMQA-FSLYSLARFEGKTHRAALKQLFALYLPVLXANWKWLTLFQVINLA 529
+L+E+L +P F +Y EG+ +L Y V WK+ + IN
Sbjct: 58 VLVEQLTASPWNNMMFMMYYGLVVEGRPFSQVKSKLKKDYASVQLTAWKFWPIVSWINYE 117
Query: 530 FIPPMLRVLFMNIVGFGW 583
++P LRVLF + V W
Sbjct: 118 YMPLQLRVLFHSFVASCW 135
>01_01_0899 - 7085140-7085539,7086777-7086868,7088098-7088187
Length = 193
Score = 34.7 bits (76), Expect = 0.066
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = +2
Query: 278 VPHYFYETVERLFPE--ESASFP-LAKKLLLERLIFAP--LMQAFSLYSLARFEGKTHRA 442
V HY+YE ++R + +F +A K+ + L+F P L+ FS LA G++
Sbjct: 57 VGHYWYEYLDRFILRRYQPKTFKFVASKVAADGLLFGPVDLLLFFSYVGLA--SGRSVEQ 114
Query: 443 ALKQLFALYLPVLXANWKWLTLFQVINLAFIPPMLRVLFMNI 568
+ ++P L Q+ N FIP ++L++N+
Sbjct: 115 VKDDVKRDFIPALVLGGTIWPAVQIANFRFIPVRYQLLYVNL 156
>05_03_0088 -
8308587-8308649,8308682-8308738,8310403-8310501,
8311501-8311620,8311715-8311837,8312416-8312471,
8315404-8315451,8315555-8315615
Length = 208
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 148 DESYYKLRSGYSWQSSITDRGWRIN 222
+E+YY+ RS SW S D GW ++
Sbjct: 104 NEAYYRHRSKGSWTLSTADNGWCVS 128
>03_02_0529 +
9218734-9218793,9218898-9220050,9220133-9220192,
9220284-9220363,9220486-9220730,9220815-9221138,
9221211-9221274,9221968-9222144
Length = 720
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 133 FTSD*DESYYKLRSGYSWQSSITDRGWRINQT*SYSRI 246
FT D DE SG + S+ T+RG+R N T +SR+
Sbjct: 245 FTVDRDEDDDDKSSGCTHPSTATNRGFRPNCTAGHSRV 282
>06_03_0095 -
16575938-16576585,16577028-16577219,16577294-16577392,
16577496-16577618,16577717-16577929,16578143-16578251,
16578339-16578427,16578604-16578880,16578974-16579084,
16579160-16580508,16581218-16581631
Length = 1207
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 395 MLALMVQRSNVPIITFLQVGMMQILQ----ETAFQLFHRNSEELYHQIIIRKNQMRE*DQ 228
+ ALM+ +PI ++ + M++ILQ +++H S++ H N+ E Q
Sbjct: 369 LTALMLYSYFIPISLYISIEMVKILQALFINQDIEMYHEESDKPTHARTSNLNE--ELGQ 426
Query: 227 V*LILQPRSVMLDCQL 180
V +L ++ L C +
Sbjct: 427 VDTVLSDKTGTLTCNM 442
>05_05_0195 + 23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 146 KTKAITSCVVGTAGSLASQIVAG 214
K+ A+ SC +GT+ +L QI+AG
Sbjct: 1133 KSAAVYSCFLGTSANLRYQIIAG 1155
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 148 DESYY-KLRSGYSWQSSITDRGWRINQT 228
D+SY+ + RS SW S D GW ++ T
Sbjct: 469 DQSYWHRHRSKGSWTLSSADNGWAVSDT 496
>11_03_0112 -
10135052-10135168,10135712-10135795,10135879-10135953,
10137801-10137978,10138048-10138212,10138291-10138337,
10140233-10140301,10140531-10140629,10141256-10141375,
10141459-10141581,10149251-10149364,10150725-10150913,
10151058-10151110,10151365-10151470,10151957-10152085
Length = 555
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 151 ESYYKLRSGYSWQSSITDRGWRI 219
+S+Y+ RS SW S D GW +
Sbjct: 247 KSFYRHRSKGSWTLSTADNGWSV 269
>09_04_0517 -
18253325-18253870,18254209-18254781,18254888-18255100,
18255554-18255685,18255804-18255944,18256104-18256325
Length = 608
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 496 MAYIVPSHKFSIYTSNVESSVHEHCWVWLGNVLSKQ 603
MAY PS K S+Y S+ S+ +W ++ +K+
Sbjct: 1 MAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKK 36
>02_01_0321 -
2162015-2162134,2162763-2162846,2162931-2163011,
2163690-2163867,2163946-2164089,2164194-2164240,
2164520-2164576,2165286-2165408,2165496-2165618,
2165959-2166072,2166169-2166176,2166272-2166458,
2174597-2174763,2174924-2175008,2176632-2176820,
2177727-2177918,2178434-2178634
Length = 699
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 148 DESYY-KLRSGYSWQSSITDRGWRINQT 228
D+SY+ + RS SW S D GW ++ T
Sbjct: 430 DQSYWHRHRSKGSWTLSSADNGWAVSDT 457
>02_01_0319 -
2148788-2148892,2149474-2149557,2149643-2149723,
2150303-2150480,2150811-2150954,2151048-2151094,
2151353-2151409,2151566-2151664,2151867-2151989,
2152083-2152205,2152594-2152707,2152972-2153160,
2153412-2153578,2153904-2153988,2155431-2155628,
2155978-2156175
Length = 663
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 148 DESYY-KLRSGYSWQSSITDRGWRINQT 228
D+SY+ + RS SW S D GW ++ T
Sbjct: 366 DQSYWHRHRSKGSWTLSSADNGWAVSDT 393
>01_03_0084 -
12286416-12286514,12286632-12286683,12286771-12286871,
12287498-12287650,12287703-12287762,12287872-12287998,
12288581-12288708,12289196-12289291,12289473-12289526,
12289603-12289689,12290954-12291057,12291163-12291246,
12291374-12291422,12291523-12291886,12292186-12292226
Length = 532
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 320 QETAFQLFHRNSEELYHQIIIRKNQMRE*DQV*LILQPRSVM 195
Q +L + E+LY QI++ ++RE D IL+ VM
Sbjct: 67 QVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVM 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,798,441
Number of Sequences: 37544
Number of extensions: 238433
Number of successful extensions: 534
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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