Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_O20
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68119-6|CAE17916.1|  181|Caenorhabditis elegans Hypothetical pr...    46   2e-05
AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical ...    29   2.2  
U28992-3|AAA68391.1|  233|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical pr...    28   5.1  

>Z68119-6|CAE17916.1|  181|Caenorhabditis elegans Hypothetical
           protein T18D3.9 protein.
          Length = 181

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 44/89 (49%)
 Frame = +2

Query: 332 SFPLAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQLFALYLPVLXANWKWLTLF 511
           S  L KKL +++L F+P   A  L++L   + ++   +   L   +  +   + K     
Sbjct: 79  SLLLVKKLCIDQLCFSPCFNAAILFNLRLLQHQSAEKSWDLLKEDWFNIYATSLKVWPFV 138

Query: 512 QVINLAFIPPMLRVLFMNIVGFGWAMFLA 598
           QV+NL F+P   RV+   +V F W  +L+
Sbjct: 139 QVVNLCFVPLNYRVILNQVVAFFWNCYLS 167


>AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical
           protein Y57A10C.11 protein.
          Length = 262

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +2

Query: 398 SLYSLARFEGKTHRAALKQLFALYLPVLXANWKWLTLFQVINLAFIPPMLRVLFMNIVGF 577
           S +++ RF  K H  +L  LF++ +  L  +   L ++   N     P+L +L+  +VG 
Sbjct: 5   SSFTMGRFTTKLHNVSL--LFSIAISCLAMDLYILPIYN--NKPITIPVLTLLYCCLVGS 60

Query: 578 GW 583
           GW
Sbjct: 61  GW 62


>U28992-3|AAA68391.1|  233|Caenorhabditis elegans Hypothetical
           protein T05C1.3 protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 443 RLYEFFLQIEPKNIEKMLALMVQRSNV 363
           R+Y +FL +E  ++EK+L   V RS +
Sbjct: 128 RVYIYFLDVEMADVEKLLRFNVDRSTI 154


>U40798-4|AAA81474.2|  430|Caenorhabditis elegans Hypothetical
           protein R13A1.3 protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 204 SWLENQSDLILFSHLVFTDYYLVVQFLTISMKQLKGCFLKNL 329
           S++EN   L +F  L F+ Y+L   FL  S+     C + NL
Sbjct: 295 SYIENAVSLGIFCPLSFSFYFLSYAFLQTSLIACSKCSIFNL 336


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,584,738
Number of Sequences: 27780
Number of extensions: 234772
Number of successful extensions: 565
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)