Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_O17
         (536 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...   123   1e-28
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...   123   1e-28
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...   123   1e-28
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...   117   1e-26
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ...    28   7.0  
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl...    28   9.3  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score =  123 bits (297), Expect = 1e-28
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +1

Query: 112 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLI 291
           M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 292 TNIGSGV 312
           TNIGSGV
Sbjct: 61  TNIGSGV 67


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score =  123 bits (297), Expect = 1e-28
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +1

Query: 112 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLI 291
           M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 292 TNIGSGV 312
           TNIGSGV
Sbjct: 61  TNIGSGV 67


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score =  123 bits (297), Expect = 1e-28
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +1

Query: 112 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLI 291
           M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGLFAKALEGINV+DLI
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60

Query: 292 TNIGSGV 312
           TNIGSGV
Sbjct: 61  TNIGSGV 67


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score =  117 bits (281), Expect = 1e-26
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +1

Query: 112 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLI 291
           M +KAELA VY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGLFAKALE INV+DLI
Sbjct: 1   MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60

Query: 292 TNIGSGV 312
           TNIGSGV
Sbjct: 61  TNIGSGV 67


>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
           protein.
          Length = 1047

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 293 VIRSRTLMPSKALANRPGQYGSTXTAAAFKMVEI 192
           +I S+ L+P+K   N P QY  T    A K  +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -1

Query: 284 SRTLMPSKALANRPGQYGSTXTAAAFKMVEIFSPVTATSSSTR 156
           S+  +P+K   N P QY  T    A K  +  SP    S  T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452


>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
           single-stranded nucleicacid binding protein protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -1

Query: 284 SRTLMPSKALANRPGQYGSTXTAAAFKMVEIFSPVTATSSSTR 156
           S+  +P+K   N P QY  T    A K  +  SP    S  T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,113,566
Number of Sequences: 53049
Number of extensions: 345745
Number of successful extensions: 894
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)