Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_O09
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   4.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   4.4  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   4.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 215  GCGGRNISLYLVERKE 262
            GC  RN+ LY  E++E
Sbjct: 1007 GCRQRNLDLYRQEKEE 1022


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 180 SAANAIALGAMAVVAVGTFLFTWWK 254
           S  N I LG++  +  G FLF  W+
Sbjct: 287 SQINGI-LGSLVAITGGCFLFRAWE 310


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = -2

Query: 345  EQNYFSAAXCSXTXFADSRLELRAVGEPSFLSTK*REMFRPPQPPSR 205
            E N  S A C      +    + A G+    + + R++    + PSR
Sbjct: 1879 ESNEISEAECDRDQLVNRNYGVNARGKDGMTTEEMRKLIERNEAPSR 1925


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 66  EKRDKTSLPFHNSLSF 19
           E R    LPFH +LSF
Sbjct: 255 EARSNLYLPFHLTLSF 270


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 66  EKRDKTSLPFHNSLSF 19
           E R    LPFH +LSF
Sbjct: 250 EARSNLYLPFHLTLSF 265


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 105 NEL*WNTLHGYKIEKRDKTSLPFHNSLS 22
           + L W++ H   +  R K ++   NSLS
Sbjct: 492 SSLQWSSTHTLDVAWRRKVTIEILNSLS 519


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 105 NEL*WNTLHGYKIEKRDKTSLPFHNSLS 22
           + L W++ H   +  R K ++   NSLS
Sbjct: 530 SSLQWSSTHTLDVAWRRKVTIEILNSLS 557


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 221 HNRHRA*CYSISSGCVAALRIRILGHR 141
           H R     + IS+GCV+ +  RI  +R
Sbjct: 18  HQRCSRDWFRISAGCVSRISNRISRNR 44


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 99  THCRFSLPQINCHFAMTKNSNSQGSNTSAAN 191
           THC  +    N      +N N+Q +N   AN
Sbjct: 412 THCVNNNQNDNIQNTNNQNDNNQKNNKKNAN 442


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,413
Number of Sequences: 438
Number of extensions: 2435
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)