Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_O04
         (643 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U78310-1|AAB61140.1|  588|Homo sapiens pescadillo protein.            106   8e-23
CR456539-1|CAG30425.1|  583|Homo sapiens PES1 protein.                106   8e-23
BC032489-1|AAH32489.1|  588|Homo sapiens pescadillo homolog 1, c...   106   8e-23

>U78310-1|AAB61140.1|  588|Homo sapiens pescadillo protein.
          Length = 588

 Score =  106 bits (254), Expect = 8e-23
 Identities = 51/123 (41%), Positives = 70/123 (56%)
 Frame = +2

Query: 275 PAEPXNRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKM 454
           P EP ++K+  KG+   +T Y  KDI+FLLHEPI+ K RE KV+ +K+R+A  + E+  +
Sbjct: 45  PHEPKHKKKVNKGSTAARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTV 104

Query: 455 RKFLRDYPEINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRL 634
            +   + P   +DHI+KERYPTF+                STFP   K       LCRRL
Sbjct: 105 ERLKDNKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRL 164

Query: 635 TVE 643
           TVE
Sbjct: 165 TVE 167



 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 166 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPRRTXKPKEGSK 309
           Y  G    ++TR            DFRR+CILKGIYP      K+ +K
Sbjct: 9   YERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNK 56


>CR456539-1|CAG30425.1|  583|Homo sapiens PES1 protein.
          Length = 583

 Score =  106 bits (254), Expect = 8e-23
 Identities = 51/123 (41%), Positives = 70/123 (56%)
 Frame = +2

Query: 275 PAEPXNRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKM 454
           P EP ++K+  KG+   +T Y  KDI+FLLHEPI+ K RE KV+ +K+R+A  + E+  +
Sbjct: 45  PHEPKHKKKVNKGSTAARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTV 104

Query: 455 RKFLRDYPEINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRL 634
            +   + P   +DHI+KERYPTF+                STFP   K       LCRRL
Sbjct: 105 ERLKDNKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRL 164

Query: 635 TVE 643
           TVE
Sbjct: 165 TVE 167



 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 166 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPRRTXKPKEGSK 309
           Y  G    ++TR            DFRR+CILKGIYP      K+ +K
Sbjct: 9   YERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNK 56


>BC032489-1|AAH32489.1|  588|Homo sapiens pescadillo homolog 1,
           containing BRCT domain (zebrafish) protein.
          Length = 588

 Score =  106 bits (254), Expect = 8e-23
 Identities = 51/123 (41%), Positives = 70/123 (56%)
 Frame = +2

Query: 275 PAEPXNRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKM 454
           P EP ++K+  KG+   +T Y  KDI+FLLHEPI+ K RE KV+ +K+R+A  + E+  +
Sbjct: 45  PHEPKHKKKVNKGSTAARTFYLIKDIRFLLHEPIVNKFREYKVFVRKLRKAYGKSEWNTV 104

Query: 455 RKFLRDYPEINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRL 634
            +   + P   +DHI+KERYPTF+                STFP   K       LCRRL
Sbjct: 105 ERLKDNKPNYKLDHIIKERYPTFIDALRDLDDALSMCFLFSTFPRTGKCHVQTIQLCRRL 164

Query: 635 TVE 643
           TVE
Sbjct: 165 TVE 167



 Score = 41.1 bits (92), Expect = 0.003
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 166 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPRRTXKPKEGSK 309
           Y  G    ++TR            DFRR+CILKGIYP      K+ +K
Sbjct: 9   YERGSATNYITRNKARKKLQLSLADFRRLCILKGIYPHEPKHKKKVNK 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,857,671
Number of Sequences: 237096
Number of extensions: 1934583
Number of successful extensions: 3223
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3223
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)