Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_O04
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006679-7|AAK84463.1|  531|Caenorhabditis elegans Lipid deplete...    89   2e-18
Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical p...    34   0.075
U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AC006679-7|AAK84463.1|  531|Caenorhabditis elegans Lipid depleted
           protein 7 protein.
          Length = 531

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 44/123 (35%), Positives = 66/123 (53%)
 Frame = +2

Query: 275 PAEPXNRKRAQKGAGGIKTLYHTKDIKFLLHEPIIWKLRELKVYQQKIRRARAQREYGKM 454
           P EP ++K+A KG+   K  Y+ KDI FL HEPII K R+ KV+ +K+   +A++E  K+
Sbjct: 45  PHEPAHKKQANKGSTANKVFYYRKDINFLAHEPIINKFRDYKVFLRKLNHLKAKKEEDKL 104

Query: 455 RKFLRDYPEINIDHIVKERYPTFVXXXXXXXXXXXXXXXXSTFPSLKKVPRDQSFLCRRL 634
           +K   + P  ++D IVKER+PTF                 +  P  + +       CR+L
Sbjct: 105 KKLYENKPVYSLDTIVKERFPTFGSALRDMDDALSLCFTFAMLPHTRVLKEGMIDSCRKL 164

Query: 635 TVE 643
           T E
Sbjct: 165 TAE 167



 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 166 YSSGEGAQFMTRXXXXXXXXXXXXDFRRICILKGIYPRRTXKPKEGSKRCRRNQ 327
           Y++G    +M+R            DFRR+CI+KGIYP      K+ +K    N+
Sbjct: 9   YTAGAAVAYMSRKQALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANK 62


>Z92830-12|CAE17777.1|  191|Caenorhabditis elegans Hypothetical
           protein F11A5.15 protein.
          Length = 191

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = -1

Query: 529 INKRGVSFLYYVINVYFWIVPQKLSHLAIFSLCSCTTNFLL 407
           I+KR   ++  + N++F+I+P  L  + I+ L SC +N LL
Sbjct: 7   ISKRKSIYILIISNIFFFIIPLYLIVIGIWKLTSCPSNQLL 47


>U23511-5|AAC46794.1|  578|Caenorhabditis elegans Hypothetical
           protein C32D5.6 protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 308 KGAGGIKTLYHT-KDIKFLLHEPIIWKLRELKVYQQ 412
           KGA  I+T Y T +  + L++EP +W  R  KV +Q
Sbjct: 164 KGALNIRTCYQTYRYCEKLMNEPSVWVGRNKKVQEQ 199


>Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical
           protein R07B5.8b protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 280 RTXKPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 426
           RT +P+   +  RR  + LS     I T R+N++  +G+   S+  +SC
Sbjct: 14  RTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 60


>Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical
           protein R07B5.8a protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 280 RTXKPKEGSKRCRRNQNTLSH*RYKIFTTRANNMETEGTKGLSTKNSSC 426
           RT +P+   +  RR  + LS     I T R+N++  +G+   S+  +SC
Sbjct: 59  RTPRPRYSPEAQRRTNSRLS--ALTIDTNRSNDLNVDGSAPSSSSAASC 105


>AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical
           protein Y39C12A.3 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
 Frame = -1

Query: 514 VSFLYYVINVYFWIVPQ------KLSHLAIFSLCSCTTNFLLIN 401
           +S LYY+ N+Y  I  +      K+ H AI++ C  ++ +++I+
Sbjct: 30  ISILYYIFNLYVTIRVKHYKNNIKILHQAIYATCPFSSAYIIID 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,931,364
Number of Sequences: 27780
Number of extensions: 313403
Number of successful extensions: 766
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)