Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_O02
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26876-1|CAA81488.1| 70|Homo sapiens ribosomal protein protein. 47 2e-05
BC000603-1|AAH00603.1| 70|Homo sapiens ribosomal protein L38 p... 47 2e-05
AB007185-1|BAA25844.1| 37|Homo sapiens ribosomal protein L38 p... 38 0.007
Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein. 30 1.8
D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein. 30 1.8
BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein. 30 1.8
AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein. 30 1.8
U02390-1|AAA20587.1| 477|Homo sapiens CAP2 protein. 30 2.4
CR457022-1|CAG33303.1| 477|Homo sapiens CAP2 protein. 30 2.4
BC008481-1|AAH08481.1| 477|Homo sapiens CAP, adenylate cyclase-... 30 2.4
AL138824-4|CAI12250.1| 474|Homo sapiens CAP, adenylate cyclase-... 30 2.4
AL034372-3|CAC26824.2| 474|Homo sapiens CAP, adenylate cyclase-... 30 2.4
CR456983-1|CAG33264.1| 414|Homo sapiens STAF65(gamma) protein. 28 9.8
BC074000-1|AAH74000.1| 414|Homo sapiens suppressor of Ty 7 (S. ... 28 9.8
AF224759-1|AAG47636.1| 412|Homo sapiens antigen ART1/P17 protein. 28 9.8
AF197954-1|AAG28523.1| 414|Homo sapiens adenocarcinoma antigen ... 28 9.8
AC074091-3|AAX93202.1| 414|Homo sapiens unknown protein. 28 9.8
AB018307-1|BAA34484.2| 419|Homo sapiens KIAA0764 protein protein. 28 9.8
>Z26876-1|CAA81488.1| 70|Homo sapiens ribosomal protein protein.
Length = 70
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +3
Query: 84 FNLTARRKDAKSVKIKKNPENVKFK 158
F LTARRKDAKSVKIKKN +NVKFK
Sbjct: 11 FLLTARRKDAKSVKIKKNKDNVKFK 35
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 191 LITDKEKAXKLKQSLPPGL 247
+ITDKEKA KLKQSLPPGL
Sbjct: 46 VITDKEKAEKLKQSLPPGL 64
>BC000603-1|AAH00603.1| 70|Homo sapiens ribosomal protein L38
protein.
Length = 70
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +3
Query: 84 FNLTARRKDAKSVKIKKNPENVKFK 158
F LTARRKDAKSVKIKKN +NVKFK
Sbjct: 11 FLLTARRKDAKSVKIKKNKDNVKFK 35
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 191 LITDKEKAXKLKQSLPPGL 247
+ITDKEKA KLKQSLPPGL
Sbjct: 46 VITDKEKAEKLKQSLPPGL 64
>AB007185-1|BAA25844.1| 37|Homo sapiens ribosomal protein L38
protein.
Length = 37
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 191 LITDKEKAXKLKQSLPPGL 247
+ITDKEKA KLKQSLPPGL
Sbjct: 13 VITDKEKAEKLKQSLPPGL 31
>Y08614-1|CAA69905.2| 1071|Homo sapiens CRM1 protein.
Length = 1071
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 114 KSVKIKKNPENVKFKASMLKVPVHPGSSLTKRRLXNLSRVYLQVSKLKK 260
K+V I K+PE VK S+LK V ++ + L R+YL + + K
Sbjct: 674 KNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYK 722
>D89729-1|BAA23415.1| 1071|Homo sapiens CRM1 protein protein.
Length = 1071
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 114 KSVKIKKNPENVKFKASMLKVPVHPGSSLTKRRLXNLSRVYLQVSKLKK 260
K+V I K+PE VK S+LK V ++ + L R+YL + + K
Sbjct: 674 KNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYK 722
>BC032847-1|AAH32847.1| 1071|Homo sapiens XPO1 protein protein.
Length = 1071
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 114 KSVKIKKNPENVKFKASMLKVPVHPGSSLTKRRLXNLSRVYLQVSKLKK 260
K+V I K+PE VK S+LK V ++ + L R+YL + + K
Sbjct: 674 KNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYK 722
>AC016727-1|AAY14949.1| 1071|Homo sapiens unknown protein.
Length = 1071
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 114 KSVKIKKNPENVKFKASMLKVPVHPGSSLTKRRLXNLSRVYLQVSKLKK 260
K+V I K+PE VK S+LK V ++ + L R+YL + + K
Sbjct: 674 KNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYK 722
>U02390-1|AAA20587.1| 477|Homo sapiens CAP2 protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 270 HHFTSLTWRPGGKLCLSXSAFSLSVMSQGVQEP 172
HH T LTW G + + SAFS+ G+ P
Sbjct: 202 HHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPP 234
>CR457022-1|CAG33303.1| 477|Homo sapiens CAP2 protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 270 HHFTSLTWRPGGKLCLSXSAFSLSVMSQGVQEP 172
HH T LTW G + + SAFS+ G+ P
Sbjct: 202 HHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPP 234
>BC008481-1|AAH08481.1| 477|Homo sapiens CAP, adenylate
cyclase-associated protein, 2 (yeast) protein.
Length = 477
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 270 HHFTSLTWRPGGKLCLSXSAFSLSVMSQGVQEP 172
HH T LTW G + + SAFS+ G+ P
Sbjct: 202 HHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPP 234
>AL138824-4|CAI12250.1| 474|Homo sapiens CAP, adenylate
cyclase-associated protein, 2 (yeast) protein.
Length = 474
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 270 HHFTSLTWRPGGKLCLSXSAFSLSVMSQGVQEP 172
HH T LTW G + + SAFS+ G+ P
Sbjct: 199 HHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPP 231
>AL034372-3|CAC26824.2| 474|Homo sapiens CAP, adenylate
cyclase-associated protein, 2 (yeast) protein.
Length = 474
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 270 HHFTSLTWRPGGKLCLSXSAFSLSVMSQGVQEP 172
HH T LTW G + + SAFS+ G+ P
Sbjct: 199 HHTTGLTWSKTGPVASTVSAFSVLSSGPGLPPP 231
>CR456983-1|CAG33264.1| 414|Homo sapiens STAF65(gamma) protein.
Length = 414
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 NQRYQRLFNLTARRKDAKSVKIKKNP-ENVKFKAS 164
++ Y+R+ N +DAK VKIK+ P ++ F S
Sbjct: 254 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVS 288
>BC074000-1|AAH74000.1| 414|Homo sapiens suppressor of Ty 7 (S.
cerevisiae)-like protein.
Length = 414
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 NQRYQRLFNLTARRKDAKSVKIKKNP-ENVKFKAS 164
++ Y+R+ N +DAK VKIK+ P ++ F S
Sbjct: 254 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVS 288
>AF224759-1|AAG47636.1| 412|Homo sapiens antigen ART1/P17 protein.
Length = 412
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 NQRYQRLFNLTARRKDAKSVKIKKNP-ENVKFKAS 164
++ Y+R+ N +DAK VKIK+ P ++ F S
Sbjct: 252 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVS 286
>AF197954-1|AAG28523.1| 414|Homo sapiens adenocarcinoma antigen
ART1 protein.
Length = 414
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 NQRYQRLFNLTARRKDAKSVKIKKNP-ENVKFKAS 164
++ Y+R+ N +DAK VKIK+ P ++ F S
Sbjct: 254 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVS 288
>AC074091-3|AAX93202.1| 414|Homo sapiens unknown protein.
Length = 414
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 NQRYQRLFNLTARRKDAKSVKIKKNP-ENVKFKAS 164
++ Y+R+ N +DAK VKIK+ P ++ F S
Sbjct: 254 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVS 288
>AB018307-1|BAA34484.2| 419|Homo sapiens KIAA0764 protein protein.
Length = 419
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 63 NQRYQRLFNLTARRKDAKSVKIKKNP-ENVKFKAS 164
++ Y+R+ N +DAK VKIK+ P ++ F S
Sbjct: 259 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVS 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,906,477
Number of Sequences: 237096
Number of extensions: 566525
Number of successful extensions: 1616
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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