Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_O02
         (357 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...    38   0.004
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...    38   0.004
AY122225-1|AAM52737.1|  561|Drosophila melanogaster RE22905p pro...    27   9.3  
AE014134-3234|AAF53889.2|  561|Drosophila melanogaster CG16798-P...    27   9.3  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 96  ARRKDAKSVKIKKNPENVKFK 158
           ARR DA++VKIKKNP N KFK
Sbjct: 15  ARRSDARAVKIKKNPTNTKFK 35



 Score = 36.7 bits (81), Expect = 0.009
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 191 LITDKEKAXKLKQSLPPGLQ 250
           ++ DKEKA K+KQSLPPGLQ
Sbjct: 46  VVQDKEKADKIKQSLPPGLQ 65



 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +1

Query: 52 MPREIKDIKDFL 87
          MPREIK++KDFL
Sbjct: 1  MPREIKEVKDFL 12


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 96  ARRKDAKSVKIKKNPENVKFK 158
           ARR DA++VKIKKNP N KFK
Sbjct: 15  ARRSDARAVKIKKNPTNTKFK 35



 Score = 36.7 bits (81), Expect = 0.009
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 191 LITDKEKAXKLKQSLPPGLQ 250
           ++ DKEKA K+KQSLPPGLQ
Sbjct: 46  VVQDKEKADKIKQSLPPGLQ 65



 Score = 27.1 bits (57), Expect = 7.0
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +1

Query: 52 MPREIKDIKDFL 87
          MPREIK++KDFL
Sbjct: 1  MPREIKEVKDFL 12


>AY122225-1|AAM52737.1|  561|Drosophila melanogaster RE22905p
           protein.
          Length = 561

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 29  VENYSSSTCRVKSKISKTF*LNGEE-ERRQIGQNKEEP*ECQVQGFDA 169
           ++NY    CRVK     T  ++ EE E+    Q K EP   QV  F A
Sbjct: 139 MQNYGPQRCRVKLVNGTTAEVSQEENEKATDQQEKHEPSGSQVHHFVA 186


>AE014134-3234|AAF53889.2|  561|Drosophila melanogaster CG16798-PA
           protein.
          Length = 561

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 29  VENYSSSTCRVKSKISKTF*LNGEE-ERRQIGQNKEEP*ECQVQGFDA 169
           ++NY    CRVK     T  ++ EE E+    Q K EP   QV  F A
Sbjct: 139 MQNYGPQRCRVKLVNGTTAEVSQEENEKATDQQEKHEPSGSQVHHFVA 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,884,883
Number of Sequences: 53049
Number of extensions: 173040
Number of successful extensions: 345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)