Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_N19
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0341 + 22406709-22407860 43 2e-04
07_03_1560 - 27730241-27730336,27730471-27730644,27730746-277309... 38 0.009
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 37 0.012
04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 35 0.049
08_02_1062 - 24016832-24016880,24016946-24016992,24017065-240171... 35 0.065
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737... 33 0.26
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200... 32 0.46
11_03_0169 + 11102198-11102272,11103716-11103767,11104071-111041... 30 1.4
09_04_0073 - 14333096-14333290,14333377-14333638,14333811-143339... 30 1.4
08_01_0462 + 4072369-4072630,4072732-4072814,4072937-4073020,407... 30 1.9
04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656... 30 1.9
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 3.2
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 5.6
03_06_0244 + 32613914-32614666 28 5.6
06_01_0066 - 554637-555548 28 7.5
03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692... 28 7.5
08_02_1444 + 27135119-27135196,27135437-27135506,27135599-271357... 27 9.9
07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434... 27 9.9
>09_06_0341 + 22406709-22407860
Length = 383
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 332 LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 511
L + T P + + I+ +G+R +FD V+ + D+ KPD +F A +LL+ P CI+
Sbjct: 236 LAVATTRPRKVIEEAIDAVGVRSFFDAVVAAEDVYRGKPDPEMFLYAAQLLSFIPERCIV 295
>07_03_1560 -
27730241-27730336,27730471-27730644,27730746-27730907,
27730993-27731101,27732268-27732374,27732875-27733141
Length = 304
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 377 IERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCI 508
++ L +FD V VS ++ EKP+ IF +AC+ L V+P +
Sbjct: 198 LQALNCDHWFDAVAVSAEVAAEKPNPTIFLKACEFLGVKPEEAV 241
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 314 HREDYLLGLITNGPSRAQWQKIERLGLRKYFDC--VLVSGD-LPWEKPDQHIFHEACKLL 484
HR L L +N R K+ L L+ + DC V++ GD +P KP IF EA K L
Sbjct: 103 HRNGVPLALASNSVRRNIDHKL--LKLKDWKDCFSVILGGDQVPRGKPSPDIFLEAAKGL 160
Query: 485 NVEPRNCIM 511
V P +C++
Sbjct: 161 GVNPSSCLV 169
>04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371
Length = 417
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 323 DYLLGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRN 502
D + + T P + + I+ +GL+ YFD ++ + D KP+ +F L +EP
Sbjct: 279 DIPIAITTPRPRLSLEEGIKAVGLQGYFDAIVAAEDFCRGKPEGEMFEVTAGQLGLEPDV 338
Query: 503 CIM 511
C++
Sbjct: 339 CLV 341
>08_02_1062 -
24016832-24016880,24016946-24016992,24017065-24017124,
24017200-24017259,24017364-24017419,24017891-24017924,
24018015-24018089,24018348-24018398,24018495-24018539,
24019073-24019148,24019495-24019898
Length = 318
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 386 LGLRKY--FDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 511
+GL ++ DC L D+ +KPD I+ A + L V+ +NC++
Sbjct: 215 IGLERFNGLDCFLAGDDVKLKKPDPSIYITAAEKLGVQSQNCLV 258
>10_04_0002 -
7372425-7372601,7372697-7372780,7372859-7373010,
7373229-7373324,7373406-7373554,7373723-7373788,
7373925-7373994,7374106-7374236,7376464-7376471,
7377946-7378002
Length = 329
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 338 LITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 511
L +N P KI G ++ F ++ ++ KP IF EA K +N P NC++
Sbjct: 48 LASNSPGSNIEAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAAKRMNTNPPNCLV 106
>10_08_0301 -
16619499-16619675,16619770-16619853,16619932-16620083,
16620296-16620391,16620473-16620627,16620791-16620856,
16620993-16621062,16621175-16621305,16622121-16622307,
16622410-16622485
Length = 397
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 338 LITNGPSRAQWQKIE-RLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCIM 511
L +N P KI G ++ F ++ ++ KP IF EA K +N P NC++
Sbjct: 114 LASNSPRSNIDAKISCHQGWKESFSAIVGGDEVEKGKPSPDIFLEAAKRMNTNPPNCLV 172
>11_03_0169 +
11102198-11102272,11103716-11103767,11104071-11104185,
11104258-11104328,11105077-11105164,11105251-11105369,
11106276-11106278,11106327-11106397
Length = 197
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 317 REDYLLGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEP 496
+ +Y + TN P Q + E+L L KY S + KP + A LNV+P
Sbjct: 67 QNNYEVHAFTNYPVWYQLVE-EKLKLSKYLSWTFCSCTVGKRKPSPDFYLHAVDHLNVDP 125
Query: 497 RNCI 508
+CI
Sbjct: 126 ASCI 129
>09_04_0073 -
14333096-14333290,14333377-14333638,14333811-14333965,
14334039-14334147,14335094-14335131
Length = 252
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 326 YLLGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNV 490
Y +TN P I LGL +F V+V G+ KP + +A K L V
Sbjct: 125 YKRAAVTNAPRINSELMISLLGLTDFFQAVIVGGECEKPKPAPFPYLKALKELQV 179
>08_01_0462 +
4072369-4072630,4072732-4072814,4072937-4073020,
4073509-4073584,4073712-4073784,4073878-4073951,
4074158-4074251,4074374-4074443
Length = 271
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 332 LGLITNGPSRAQWQKIERLGLRKYFDCVLVSGDLPWEKPDQHIFHEACKLLNVEPRNCI 508
L +++N +R + + ++ L + FD ++VS ++ EKP IF A + VE +
Sbjct: 171 LAVVSNFDTRLR-KLLKDLHVSDMFDAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAV 228
>04_01_0501 -
6558120-6559312,6559441-6559518,6559818-6559877,
6560000-6560083,6560407-6560566
Length = 524
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = -1
Query: 455 VDQVSPRAGPR---IRXRSRSICEARGVRFSAIELAMVRS*SDREDNPPCATFIEQP-FV 288
V VSPRA PR I+ SR + ++ VRS + ED PPC T + P V
Sbjct: 173 VTLVSPRAAPREWKIKPYSRKYLDG-------LKPVTVRSVPNPEDAPPCTTRLNVPAMV 225
Query: 287 ITCSDLCCNSAHYTTKV 237
I L N H T V
Sbjct: 226 IELGGLTGNYWHDFTDV 242
>01_06_1670 - 39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Frame = -2
Query: 490 NVKKFACFVEDVLIRFLPGQVPGYEXAVEVFAKPEAFDFLPLSSRWSVRDQTEKIIXXXX 311
NVKK A DVL ++ G E EV E + W D +K +
Sbjct: 797 NVKKAAAMDSDVLSSYVSKLAGGIEKITEVLRLNE--EVKSREDAWRFHDSMQKFLKRAD 854
Query: 310 XXXXXXXXXXXLTYAVIQHITQQKSNRPARYD--PFRFFHFYFDYI 179
+ ++++ IT+ A+ + PFR F D++
Sbjct: 855 DDIIRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVVRDFL 900
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 265 VIQHITQQKSNRPARYDPFRFFHFYFDYI 179
+ Q I K+N A ++PF+FF Y +Y+
Sbjct: 346 ICQEIDISKANWSALFEPFQFFEAYKNYL 374
>03_06_0244 + 32613914-32614666
Length = 250
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 467 RGRCVDQVSPRAGPRIRXRSRSICEARGV 381
R RC + S PR+R R R++ EAR V
Sbjct: 53 RRRCGRRESVTGSPRVRPRGRAVREARAV 81
>06_01_0066 - 554637-555548
Length = 303
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 341 ITNGPSRAQWQKIERLGLRKYFDCVLVSG-DLPWEKPDQHIFHEACKLLNVEPRNCIM 511
+TN P I LGL +F ++ + D KP + A LL PR+ ++
Sbjct: 178 VTNAPRANADLMISILGLSDFFQVIVAAADDCDLPKPSPEPYLRALSLLGASPRHTLV 235
>03_06_0300 +
32967935-32968029,32968975-32969077,32969175-32969244,
32969464-32969581,32969687-32969744,32969831-32969895,
32969990-32969996,32970087-32970147,32970757-32970776,
32970858-32970923,32971126-32971293,32971372-32971629,
32972098-32972310,32972824-32973099
Length = 525
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 493 LNVKKFACFVEDVLIRFLPGQVPGYEXAVEVFAK 392
LN K+F F++ +L G++P VE+F K
Sbjct: 266 LNGKEFVSFLQQILEALNKGEIPSTGSLVEIFNK 299
>08_02_1444 +
27135119-27135196,27135437-27135506,27135599-27135758,
27136005-27136086,27136335-27136551,27136729-27136793,
27137039-27137293
Length = 308
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 419 VSGDLPWE-KPDQHIFHEACKLLNVEPRNCI 508
+ G++ W KPD+ I+ A L V P CI
Sbjct: 212 LGGEVKWMGKPDKVIYTSAMSLAGVNPHECI 242
>07_01_0584 +
4345134-4345237,4346165-4346267,4346397-4346466,
4346552-4346590,4346684-4346801,4346894-4346951,
4347031-4347095,4347281-4347341,4347678-4347779,
4348005-4348070,4348399-4348443,4348540-4348797,
4349289-4349501,4350103-4350411,4350461-4350613
Length = 587
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 493 LNVKKFACFVEDVLIRFLPGQVPGYEXAVEVFAK 392
LN K+F F+ +L G++P VEVF K
Sbjct: 266 LNGKEFVSFLRQILEALNKGEIPSTGSLVEVFNK 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,410,142
Number of Sequences: 37544
Number of extensions: 291861
Number of successful extensions: 584
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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