Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_N19
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   1.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   4.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   6.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.0  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 604 IYQTYHHIHDRQ 639
           IYQ++HH+H  Q
Sbjct: 69  IYQSHHHLHHHQ 80


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 381 NASGFANTSTAXSYPGTCPGRNLINTSSTKHANFLTLSPVT 503
           N S  A TST+ SYPG   G +   + S+  + F ++SP +
Sbjct: 70  NDSAAAITSTSPSYPG---GGSSSPSPSSPSSFFSSVSPTS 107


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 523 LCPXHNAVTGLNVKKFAC 470
           LCP  N   G   K F C
Sbjct: 442 LCPHFNVTDGETTKTFCC 459


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 55  QLNIIHINCMQITNHNSLARF*PLLT*FVE 144
           Q+N +  NC  IT  NS  +   LL  F++
Sbjct: 95  QVNRLVNNCKDITESNSCKKSSKLLQCFID 124


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +3

Query: 345 RTDHRELNGRKSNASGF----ANTSTAXSYPGTCPGRNLINTSSTKHAN 479
           +++H E  G++  A+ F     N+ +       CPG  +  +  T+H N
Sbjct: 779 KSEHCE-KGKEYYAASFHTDIGNSQSLAHQDQCCPGFTMTKSGKTRHQN 826


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,325
Number of Sequences: 438
Number of extensions: 3294
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)