Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP05_F_N18
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0305 - 16644276-16644290,16644611-16645258,16646764-166468...    29   3.2  
11_04_0443 - 17808897-17809110,17809169-17813652                       29   4.2  
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134...    29   4.2  
04_03_0028 + 9698427-9698849,9698862-9699227                           27   9.7  
01_01_0889 + 7008077-7009261                                           27   9.7  

>10_08_0305 -
           16644276-16644290,16644611-16645258,16646764-16646865,
           16646980-16647111,16647574-16648242
          Length = 521

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 536 HNLFEHVDFWVDPLTSERQTV*LCTQVYCKILLGHQLFQLYAKVN 402
           HNL + V  + D    E Q    C+QV+C +L+   L  LY+K N
Sbjct: 198 HNLPDEVTLFEDHKCPEEQIPSKCSQVFCGVLIFQIL--LYSKRN 240


>11_04_0443 - 17808897-17809110,17809169-17813652
          Length = 1565

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +1

Query: 514 STCSKRLCXISSRYGHFIQWRLRFSEEFDYCNR 612
           S  S RLC ISS +  +IQW + +++EF  CN+
Sbjct: 449 SQSSGRLC-ISS-HKKYIQWLISWNQEFPSCNQ 479


>04_01_0126 -
           1340540-1341376,1341437-1341900,1342105-1342156,
           1342225-1342799,1343596-1343703,1345823-1346155,
           1346783-1349306
          Length = 1630

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 374 YEETGHSVPNSLLHTIETVDDLTEFYNTPVYTTTPFDALKLMDLPK 511
           YEE  H+  N     +  +   +  Y   ++ T+PF A+K++DL K
Sbjct: 644 YEELYHATENFNERNLVGIGSFSSVYKAVLHATSPF-AVKVLDLNK 688


>04_03_0028 + 9698427-9698849,9698862-9699227
          Length = 262

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 23/70 (32%), Positives = 30/70 (42%)
 Frame = +2

Query: 398 PNSLLHTIETVDDLTEFYNTPVYTTTPFDALKLMDLPKNLHVQKDYVXFHPDTDTLFNGV 577
           P SLL+     DD  E  + PV    P   L+L  LP+ LH        H D +      
Sbjct: 199 PESLLND---EDDSGETLDLPVLEPPPQPPLELKPLPQGLH----NAFLHGDKEAPVVIS 251

Query: 578 SAFPKSSTIV 607
           ++FPK   IV
Sbjct: 252 TSFPKMKPIV 261


>01_01_0889 + 7008077-7009261
          Length = 394

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +2

Query: 194 KKVQAAAESLAARGFLRPTKSWDPPTNINETILKICATYGLNGNSEFEALDTKFTVLKA 370
           + V +AAE    RGF    +S DP  +   +++++     L G +E E L   +  L A
Sbjct: 315 RPVVSAAEEQVRRGFAVVKRSRDPYADFRSSMVEMVVGRQLFGAAELERLLRSYLSLNA 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,155,585
Number of Sequences: 37544
Number of extensions: 318156
Number of successful extensions: 653
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)