Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP05_F_N18
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-1|CAA92691.1| 285|Caenorhabditis elegans Hypothetical pr... 65 5e-11
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p... 32 0.40
Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical pr... 31 0.53
AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-li... 29 2.8
AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical ... 29 2.8
AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical ... 29 2.8
AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical ... 28 5.0
U80843-6|AAB37971.1| 345|Caenorhabditis elegans Skn-1 dependent... 27 8.7
>Z68318-1|CAA92691.1| 285|Caenorhabditis elegans Hypothetical
protein T21B10.1 protein.
Length = 285
Score = 64.9 bits (151), Expect = 5e-11
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Frame = +2
Query: 86 TKKK*EMFRNVLLPLR-RGSFQVTSIRQAQKKYPK-VDKKVQAAAESLAARGFLRPTKSW 259
T ++ E R L +R R S QVT+ + ++ + + +++ ARGFL+ T+++
Sbjct: 33 TLEEQESLRKTLPSIRARESTQVTASADSVTEFDDDLLTMSRIDTDAIRARGFLKYTQNY 92
Query: 260 DPPTNINETILKICATYGLNGNSEFEALD----------TKFTVLKACYEETGHSVPNSL 409
P ++ +L+ ++ + + E +D KF +L + H N
Sbjct: 93 VPGVDVKNQVLEAASSCLRSAGVKSENVDQYKFVEGDNSVKFELLNRLGKSIEHWPTNGK 152
Query: 410 LHTIETVDDLTEFYNTPVYTTTPF-DALKLMDLPKNLHVQKDYVXFHP-DTDTLFNGVSA 583
L +ETV D+ EFY TPV T + + + + PKN+ + + FHP DT G++A
Sbjct: 153 LLHLETVADVVEFYQTPVKNVTKYTEMARDENKPKNVSIMEHAARFHPEDTHMYHGGITA 212
Query: 584 FPKSSTIVTGLKAR 625
FP S V L+ +
Sbjct: 213 FPGSGGEVLSLRQK 226
>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
protein F26G1.1 protein.
Length = 1021
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 296 ICATYGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEF 448
+C++ L F LD ++ C E+ G NSL+H IET+ + T+F
Sbjct: 715 VCSSLSLIDFQAFTNLDQCIELIVRCREDMGLR-QNSLIHIIETLFNFTQF 764
>Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical
protein F31D4.7 protein.
Length = 572
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 245 PTKSWDPPTNI--NETILKICATYGLNGNSEFEALDT 349
PTKS D TN+ ET L++C G N N EF ++
Sbjct: 513 PTKSPDEVTNLVEYETALRVCEQIGDNNNEEFSEAES 549
>AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-like
protein protein.
Length = 311
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 47 RII*KYNKTD*LXTKKK*EMFRNVLLP-LRRGSFQVTSIRQAQKKYPKVDKKVQAAAESL 223
R+I KY + + ++ E++ V P + + + + +K +VDK V ++
Sbjct: 112 RLIAKYRQEEKFVIRETPELYETVTRPYIEKYQLNLNWVYNCLEKRSEVDKIVFEDPDNE 171
Query: 224 AARGFLRPTKSWDPPTNINETILKICATYGL 316
L+ K WD T N +L IC +GL
Sbjct: 172 NGFVLLQDIK-WDGKTLENLYVLAICHRHGL 201
>AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical
protein Y113G7A.9 protein.
Length = 311
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 47 RII*KYNKTD*LXTKKK*EMFRNVLLP-LRRGSFQVTSIRQAQKKYPKVDKKVQAAAESL 223
R+I KY + + ++ E++ V P + + + + +K +VDK V ++
Sbjct: 112 RLIAKYRQEEKFVIRETPELYETVTRPYIEKYQLNLNWVYNCLEKRSEVDKIVFEDPDNE 171
Query: 224 AARGFLRPTKSWDPPTNINETILKICATYGL 316
L+ K WD T N +L IC +GL
Sbjct: 172 NGFVLLQDIK-WDGKTLENLYVLAICHRHGL 201
>AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical
protein C16A11.3 protein.
Length = 726
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 200 VQAAAESLAARGFLRPTKSWDPPTNINETILKICATYGLNGNSEFEALDT 349
+ A ++ + +R SW ++ LKI ++ L G S FE +D+
Sbjct: 438 IMKAVTAINSANLIRMEDSWRINESVPNGFLKIAISFELKGRSVFEVMDS 487
>AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical
protein Y73B3A.16 protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 209 AAESLAARGFLRPTKSWDPPTNINETILKICATYGLNGNSEFEALDT 349
A ++ + +R SW ++ LKI ++ L G S FE +D+
Sbjct: 3 AVTAINSANLIRMEDSWRINESVPNGFLKIAISFELKGRSVFEVMDS 49
>U80843-6|AAB37971.1| 345|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 4 protein.
Length = 345
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 344 DTKFTVLKACYEETGHSVPNSLLHTIETVDDL 439
D T+ K Y+ T H+ N LH I+ D+L
Sbjct: 52 DHSITINKDTYQFTVHNTKNGFLHDIDERDEL 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,680,801
Number of Sequences: 27780
Number of extensions: 316627
Number of successful extensions: 757
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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